RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 IGFBP2P18065 325 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 CEP250Q9BV73 2442 aa6.01□□□□□ -1.45
COLCA1-205ENST00000620864 B5MCH6 92 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 RNASE4P34096 147 aaKnown RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 PARP14Q460N5 1801 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 ARHGEF17Q96PE2 2063 aaPredicted RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 A0A1W2PPV9 198 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 PYY3Q5JQD4 70 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 TMEM167AQ8TBQ9 72 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 KLHDC3Q9BQ90 382 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 TTTY12Q9BZ98 90 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 ANAPC10Q9UM13 185 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 TDRD15B5MCY1 1934 aaKnown RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 TDRD6O60522 2096 aaKnown RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 TRGV2A0A075B6R0 118 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 A0A1W2PPE3 182 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 ZIC3O60481 467 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 LINC01545Q5VT33 79 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 C11orf44Q8N8P7 122 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 IGHV1-24A0A0C4DH33 117 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 PAX4O43316 350 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 LINC00271P0C7V0 271 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 PRSS41Q7RTY9 318 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 C9orf40Q8IXQ3 194 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 LINC01587Q99440 93 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 NAA38Q9BRA0 125 aaKnown RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 LHFPL6Q9Y693 200 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 COL24A1Q17RW2 1714 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 SEC16AO15027 2179 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 A8MWP6 167 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 TRGV3P03979 118 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 LYPD1Q8N2G4 141 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 SLC25A45Q8N413 288 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 RNASE7Q9H1E1 156 aaKnown RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 PKIGQ9Y2B9 76 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 IGKV1D-42A0A075B6H8 117 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 C15orf61A6NNL5 157 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 B9A039 149 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 LILRA1O75019 489 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 TFF3Q07654 80 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 OR11H6Q8NGC7 330 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 PRADC1Q9BSG0 188 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 FAM186AA6NE01 2351 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 CACNA1DQ01668 2161 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 CACNA1EQ15878 2313 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 NPSP0C0P6 89 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 ZNF385AQ96PM9 386 aaKnown RBP6□□□□□ -1.45
COLCA1-205ENST00000620864 SPATA25Q9BR10 227 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 PSG8Q9UQ74 426 aa6□□□□□ -1.45
COLCA1-205ENST00000620864 J3KT08 172 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 C8orf46Q8TAG6 207 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 ITLN1Q8WWA0 313 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 UCN2Q96RP3 112 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 RTBDNQ9BSG5 229 aaPredicted RBP5.99□□□□□ -1.45
COLCA1-205ENST00000620864 A0A0U1RQV1 116 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 C9JAW5 83 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 CCL1P22362 96 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 Q0VG73 95 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 ATRAIDQ6UW56 229 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 DPM3Q9P2X0 92 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 TRAV14DV4A0A0A6YYC5 116 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 CCL3P10147 92 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 TCTEX1D4Q5JR98 221 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 DUX4L9Q6RFH8 374 aaPredicted RBP5.99□□□□□ -1.45
COLCA1-205ENST00000620864 C7orf69Q9H7B7 122 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 CADP27708 2225 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 CD7P09564 240 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 MPV17L2Q567V2 206 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 Q5BKY6 102 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 MIR17HGQ75NE6 70 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 FBXL7Q9UJT9 491 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 TP53BP1Q12888 1972 aaPredicted RBP5.99□□□□□ -1.45
COLCA1-205ENST00000620864 K7EP34 96 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 RPUSD1Q9UJJ7 312 aaKnown RBP5.99□□□□□ -1.45
COLCA1-205ENST00000620864 FAM231BA6NCW3 169 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 SIVA1O15304 175 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 PIN1P1O15428 100 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 HERV-K104P63124 156 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 LIMS2Q7Z4I7 341 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 FDCSPQ8NFU4 85 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 OR13A1Q8NGR1 328 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 TMEM141Q96I45 108 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 GVINP1Q7Z2Y8 2422 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 THADAQ6YHU6 1953 aa5.99□□□□□ -1.45
COLCA1-205ENST00000620864 GAGE12HA6NDE8 117 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 FSHBP01225 129 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 GATA4P43694 442 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 LYPD6BQ8NI32 183 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 YPEL1O60688 119 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 YPEL2Q96QA6 119 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 FAM60AQ9NP50 221 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 SCN1AP35498 2009 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 FNDC10F2Z333 226 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 GREM1O60565 184 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 LINC00312Q9Y6C7 94 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 PATJQ8NI35 1801 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 KMT2EQ8IZD2 1858 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 AZU1P20160 251 aa5.98□□□□□ -1.45
COLCA1-205ENST00000620864 SLC22A18ASQ8N1D0 253 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms