RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FAM57AQ8TBR7 257 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 ALKBH7Q9BT30 221 aaPredicted RBP5.71□□□□□ -1.5
NEDD9-216ENST00000620854 S4R3C0 116 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV3OR16-13A0A075B7E8 117 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV3-74A0A0B4J1X5 117 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 ECSCRQ19T08 205 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF841Q6ZN19 808 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 TMEM136Q6ZRR5 245 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 NIT1Q86X76 327 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 MDS2Q8NDY4 140 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 STXBP6Q8NFX7 210 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 SNRNP40Q96DI7 357 aaKnown RBP5.71□□□□□ -1.5
NEDD9-216ENST00000620854 RAB1BQ9H0U4 201 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 SVEP1Q4LDE5 3571 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 GOSR1O95249 250 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 C9orf106Q8NAJ2 232 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 OR9G1Q8NH87 305 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 SRSF12Q8WXF0 261 aaKnown RBP5.7□□□□□ -1.5
NEDD9-216ENST00000620854 C1orf159Q96HA4 380 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF714Q96N38 554 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 IGKV3D-15A0A087WSY6 115 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 WISP2O76076 250 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 IGLL1P15814 213 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 CX3CL1P78423 397 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 Q0VG73 95 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 VWC2Q2TAL6 325 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 MPV17L2Q567V2 206 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 C19orf35Q6ZS72 473 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-216ENST00000620854 GNB1LQ9BYB4 327 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 SPRR3Q9UBC9 169 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 HIGD1AQ9Y241 93 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 IGHV3OR16-8A0A075B7F1 116 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 PYYP10082 97 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 CEACAM3P40198 252 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF138P52744 262 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 TBR1Q16650 682 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 NRN1LQ496H8 165 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 RAB1CQ92928 201 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 HSPB8Q9UJY1 196 aa5.7□□□□□ -1.5
NEDD9-216ENST00000620854 F11RQ9Y624 299 aaKnown RBP5.7□□□□□ -1.5
NEDD9-216ENST00000620854 CSPG4Q6UVK1 2322 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 IGF2RP11717 2491 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 hDV102S1A0JD36 115 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 GGTLC3B5MD39 225 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 NUDT3O95989 172 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 CTRLP40313 264 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 SRSF9Q13242 221 aaKnown RBP eCLIP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 TIMM23BQ5SRD1 257 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 MORN5Q5VZ52 161 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 ACP7Q6ZNF0 438 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 GOLT1AQ6ZVE7 132 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 ARL6IP6Q8N6S5 226 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 OR10W1Q8NGF6 305 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF430Q9H8G1 570 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 TNRC6AQ8NDV7 1962 aaKnown RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 MGPP08493 103 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 FCGR2BP31994 310 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 CA7P43166 264 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 RBX1P62877 108 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 FAM27E3Q08E93 113 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 LDLRAD2Q5SZI1 272 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 EBLN2Q6P2I7 272 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 WDR82Q6UXN9 313 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 ZNF788Q6ZQV5 615 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 WFDC3Q8IUB2 231 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 CD177Q8N6Q3 437 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 FAM216BQ8N7L0 139 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 OR52E5Q8NH55 327 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 IGKV1OR2-108A0A075B7D4 117 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 GAGE10A6NGK3 116 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 K7ERU9 68 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 SS18L1O75177 396 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 GCSHP23434 173 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 VDAC2P45880 294 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 UBE2V1Q13404 147 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 MORN2Q502X0 79 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 LINC00173Q6ZV60 143 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 ZCCHC24Q8N2G6 241 aaKnown RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 C18orf32Q8TCD1 76 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 KLK15Q9H2R5 256 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 CECR9P0C854 216 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 CKS2P33552 79 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 LGALS7P47929 136 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 GNG5P63218 68 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 TWIST1Q15672 202 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 FBLN7Q53RD9 439 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 Q6ZS92 163 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 TCF24Q7RTU0 167 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 C11orf53Q8IXP5 236 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 C1orf162Q8NEQ5 155 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-216ENST00000620854 COX11Q9Y6N1 276 aa5.69□□□□□ -1.5
NEDD9-216ENST00000620854 OR2T8A6NH00 312 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 AMY1AP04745 511 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 LY6DQ14210 128 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 SPANXN1Q5VSR9 72 aa5.68□□□□□ -1.5
NEDD9-216ENST00000620854 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms