RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ATP5IP56385 69 aaPredicted RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 TIRAPP58753 221 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 LPCAT3Q6P1A2 487 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 ZNF818PQ6ZRF7 136 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 UBAC2Q8NBM4 344 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 GPR82Q96P67 336 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 TAS2R8Q9NYW2 309 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 DOK5Q9P104 306 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 PRSS47A8MTI9 375 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 ATG12O94817 140 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 SPHARQ15513 63 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 ESRGQ1W209 222 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 CDNFQ49AH0 187 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 ETFRF1Q6IPR1 90 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 Q8WTZ3 238 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 TMEM263Q8WUH6 116 aaKnown RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 TMEM203Q969S6 136 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 ZNF586Q9NXT0 402 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 MDFICQ9P1T7 246 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 TRAV9-2A0A087WT02 112 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 IGHV3-49A0A0A0MS15 119 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 NPIPB6E9PJ23 425 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 CRXO43186 299 aaPredicted RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 CFDP00746 253 aaPredicted RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 S100A7P31151 101 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 FCGR2CP31995 323 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 LPAR6P43657 344 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 C2orf83Q53S99 150 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 AADACL3Q5VUY0 350 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 EBLN2Q6P2I7 272 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 GPR141Q7Z602 305 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 OR5AP2Q8NGF4 316 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 OR4D5Q8NGN0 318 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 RNASE8Q8TDE3 154 aaKnown RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 ZNF486Q96H40 463 aaPredicted RBP3.11□□□□□ -1.91
SNCA-213ENST00000618500 ODF3Q96PU9 254 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 FXYD6Q9H0Q3 95 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 SPATA2Q9UM82 520 aa3.11□□□□□ -1.91
SNCA-213ENST00000618500 IGHV3OR16-8A0A075B7F1 116 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 LRCOL1A6NCL2 159 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 GPR31O00270 319 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 SIVA1O15304 175 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 NUDT3O95989 172 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 DNAH10OSP0CZ25 163 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 GNG2P59768 71 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 ZNF415Q09FC8 603 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 INSL4Q14641 139 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 NOXA1Q86UR1 476 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 MAFIPQ8WZ33 124 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 GNPNAT1Q96EK6 184 aaPredicted RBP3.1□□□□□ -1.91
SNCA-213ENST00000618500 C7orf50Q9BRJ6 194 aaKnown RBP3.1□□□□□ -1.91
SNCA-213ENST00000618500 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 AK6Q9Y3D8 172 aaKnown RBP3.1□□□□□ -1.91
SNCA-213ENST00000618500 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
SNCA-213ENST00000618500 IGKV3-7A0A075B6H7 116 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 TRAV5A0A0B4J249 113 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 F5H768 121 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 BOLA2-SMG1P6H3BVE0 249 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 M0QYG6 137 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 IGLV2-8P01709 118 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 HTR2BP41595 481 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 DAZ2Q13117 558 aaKnown RBP3.1□□□□□ -1.91
SNCA-213ENST00000618500 FAM219AQ8IW50 185 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 C10orf126Q8N4M7 172 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 BEST4Q8NFU0 473 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 OR11H7Q8NGC8 314 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 OR51H1Q8NH63 302 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 OR4A16Q8NH70 328 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 SECTM1Q8WVN6 248 aa3.1□□□□□ -1.91
SNCA-213ENST00000618500 TIMM8BQ9Y5J9 83 aaPredicted RBP3.1□□□□□ -1.91
SNCA-213ENST00000618500 A0A087X0K7 114 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 IGHV3-21A0A0B4J1V1 117 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 TRDV1A0A1B0GX56 115 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 ZNF701M0R085 212 aaPredicted RBP3.09□□□□□ -1.91
SNCA-213ENST00000618500 FABP1P07148 127 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 HTN3P15516 51 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 CXCL2P19875 107 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 S100GP29377 79 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 GDF5OSQ5U4N7 250 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 SFXN4Q6P4A7 337 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 TEPPQ6URK8 271 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 CMTM1Q8IZ96 169 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 PQLC1Q8N2U9 271 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 Q8N814 137 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 NRG4Q8WWG1 115 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 TMEM230Q96A57 120 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 WDR12Q9GZL7 423 aaKnown RBP3.09□□□□□ -1.91
SNCA-213ENST00000618500 A0A096LPF7 62 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 IGLV5-52A0A0A0MRZ9 124 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 DBX1A6NMT0 343 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 IGLV2-11P01706 119 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 MYL9P24844 172 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 G6PCP35575 357 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 TAS2R46P59540 309 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 HERV-K104P61576 105 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 TIGITQ495A1 244 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 LYSMD2Q8IV50 215 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 IQCF2Q8IXL9 164 aa3.09□□□□□ -1.91
SNCA-213ENST00000618500 C8orf59Q8N0T1 100 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms