RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SLURP1P55000 103 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 PKIGQ9Y2B9 76 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 IGHV3-73A0A0B4J1V6 119 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 C7orf66A4D0T2 115 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 BCL2L11O43521 198 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 RBFOX2O43251 390 aaKnown RBP eCLIP8.82□□□□□ -1
POLR2A-209ENST00000617998 UCP3P55916 312 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 TEX36Q5VZQ5 186 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 TTC9CQ8N5M4 171 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 SPSB4Q96A44 273 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 NAT1P18440 290 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
POLR2A-209ENST00000617998 FOXB2Q5VYV0 432 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 RAB24Q969Q5 203 aa8.82□□□□□ -1
POLR2A-209ENST00000617998 ZNF815PA8K554 130 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 IGFBP2P18065 325 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 VWC2Q2TAL6 325 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 CHAC2Q8WUX2 184 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 ZNF98A6NK75 572 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 LYPD3O95274 346 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 SLAQ13239 276 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 OR10W1Q8NGF6 305 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 SLC25A39Q9BZJ4 359 aaPredicted RBP8.81□□□□□ -1
POLR2A-209ENST00000617998 C2orf16Q68DN1 1984 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 TRBV6-7A0A0A0MS04 114 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 FCN1O00602 326 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 AWAT1Q58HT5 328 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 TMEM14BQ9NUH8 114 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 RAB19A4D1S5 217 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 DMRTA1Q5VZB9 504 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 KLK15Q9H2R5 256 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 HIVEP3Q5T1R4 2406 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 A0A1B0GWJ7 208 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 C19orf35Q6ZS72 473 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 SLC35B3Q9H1N7 401 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 TP53BP1Q12888 1972 aaPredicted RBP8.81□□□□□ -1
POLR2A-209ENST00000617998 DKK1O94907 266 aa8.81□□□□□ -1
POLR2A-209ENST00000617998 NXT2Q9NPJ8 142 aaKnown RBP8.81□□□□□ -1
POLR2A-209ENST00000617998 FBLL1A6NHQ2 334 aaKnown RBP8.8□□□□□ -1
POLR2A-209ENST00000617998 CTDSPLO15194 276 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 CD8AP01732 235 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 MRPL54Q6P161 138 aaKnown RBP8.8□□□□□ -1
POLR2A-209ENST00000617998 COPS9Q8WXC6 57 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 PPP1R3EQ9H7J1 279 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 Q9HAA7 133 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 KAAG1Q9UBP8 84 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 NYNRINQ9P2P1 1898 aaKnown RBP8.8□□□□□ -1
POLR2A-209ENST00000617998 KIF26AQ9ULI4 1882 aaPredicted RBP8.8□□□□□ -1
POLR2A-209ENST00000617998 H3BUA1 57 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 FAM90A2PQ658T7 463 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 CD28P10747 220 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 APOMO95445 188 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 Q6ZR03 302 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 VN1R17PQ8TDU5 208 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 TRBV20OR9-2A0A075B6H5 130 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 H3BRM9 83 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 PAX4O43316 350 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 OR11H2Q8NH07 326 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 AQP10Q96PS8 301 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 MEGF9Q9H1U4 602 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 MRPS16Q9Y3D3 137 aaKnown RBP8.8□□□□□ -1
POLR2A-209ENST00000617998 PLCE1Q9P212 2302 aa8.8□□□□□ -1
POLR2A-209ENST00000617998 SMIM8Q96KF7 97 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 IGF2BP2-AS1Q96M15 143 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 PRR32B1ATL7 298 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 DANCRP0C864 163 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 FOLR2P14207 255 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 CKS1BP61024 79 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 TMEM91Q6ZNR0 172 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 TRAPPC1Q9Y5R8 145 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 BLCAPP62952 87 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 KNCNA6PVL3 124 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 SERF2P84101 59 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 CSTL1Q9H114 145 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 MAP1LC3AQ9H492 121 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 F11RQ9Y624 299 aaKnown RBP8.79□□□□□ -1
POLR2A-209ENST00000617998 CHD3Q12873 2000 aaKnown RBP8.79□□□□□ -1
POLR2A-209ENST00000617998 PLXND1Q9Y4D7 1925 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 CCL1P22362 96 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 MORN3Q6PF18 240 aaPredicted RBP8.79□□□□□ -1
POLR2A-209ENST00000617998 KLHDC3Q9BQ90 382 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 TMPRSS5Q9H3S3 457 aa8.79□□□□□ -1
POLR2A-209ENST00000617998 GRIFINA4D1Z8 144 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 C11orf45Q8TAV5 145 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 C2CD4CQ8TF44 421 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 MBD6Q96DN6 1003 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 ZNF319Q9P2F9 582 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 YLPM1P49750 1951 aaKnown RBP8.78□□□□□ -1
POLR2A-209ENST00000617998 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 IGKV2D-24A0A075B6R9 120 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 A0A0J9YY99 117 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 SRSF8Q9BRL6 282 aaKnown RBP8.78□□□□□ -1
POLR2A-209ENST00000617998 NDUFA4O00483 81 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 PSMB2P49721 201 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 LTBP2Q14767 1821 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 FABP4P15090 132 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 SEM1Q6ZVN7 128 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
POLR2A-209ENST00000617998 GGACTQ9BVM4 153 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms