RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 SLC35B3Q9H1N7 401 aa13.18□□□□□ -0.3
TRAPPC3-210ENST00000617904 PRDM13Q9H4Q3 707 aa13.18□□□□□ -0.3
TRAPPC3-210ENST00000617904 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 K7EIM0 57 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 NUPL2O15504 423 aaKnown RBP13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 HYPMO75409 117 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 OR2J3O76001 311 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 OR5G3P0C626 314 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 BCL2P10415 239 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 FGF8P55075 233 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 ZNF726P1Q15940 193 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 HAGHQ16775 308 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 FBLN7Q53RD9 439 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 KLK9Q9UKQ9 250 aa13.17□□□□□ -0.3
TRAPPC3-210ENST00000617904 IGKV1OR2-108A0A075B7D4 117 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 BRI3O95415 125 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 STAG3L2P0CL84 134 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 STAG3L3P0CL85 134 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 BCL6BQ8N143 479 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 SVBPQ8N300 66 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
TRAPPC3-210ENST00000617904 A0A0G2JLM5 398 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 TOMM40O96008 361 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 PLP1P60201 277 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 SLC35B1P78383 322 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 RHOGP84095 191 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 USMG5Q96IX5 58 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 TMEM231Q9H6L2 316 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 ARL2-SNX15V9GYD0 113 aa13.15□□□□□ -0.3
TRAPPC3-210ENST00000617904 MDFIC2A0A1B0GVS7 189 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR7C2O60412 319 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 APOC3P02656 99 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 ORM2P19652 201 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 ZNF90Q03938 601 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 TNCP24821 2201 aa13.14□□□□□ -0.31
TRAPPC3-210ENST00000617904 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 HMGB3O15347 200 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 HOXA3O43365 443 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 PDE6DO43924 150 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 NDUFB8O95169 186 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 SNAPINO95295 136 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 AMY1AP04745 511 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 LYZP61626 148 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 CCL20P78556 96 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 DEFA5Q01523 94 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 RXFP4Q8TDU9 374 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 UHRF2Q96PU4 802 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 SOX21Q9Y651 276 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 TRGV3P03979 118 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 ARL14EPLP0DKL9 152 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 GCHFRP30047 84 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 TIGITQ495A1 244 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 LINC00052Q96N35 136 aa13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 SEPSECSQ9HD40 501 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-210ENST00000617904 SH2D7A6NKC9 451 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 F6UZH7 168 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 G3V318 75 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 PSG1P11464 419 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 TPPP2P59282 170 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 ICAM4Q14773 271 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 MRPL36Q9P0J6 103 aaKnown RBP13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 DOK5Q9P104 306 aa13.12□□□□□ -0.31
TRAPPC3-210ENST00000617904 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 BMPR1BO00238 502 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 PF4V1P10720 104 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 RAB9AP51151 201 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms