RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RAB5BP61020 215 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 TTC9CQ8N5M4 171 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 RASL11BQ9BPW5 248 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 OR51M1Q9H341 326 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 FBN2P35556 2912 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 HLA-DRB1P01911 266 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 CRYBB3P26998 211 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 SUMO1P63165 101 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 NECAP1Q8NC96 275 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 LRRK2Q5S007 2527 aa13.67□□□□□ -0.22
PCDHGC3-205ENST00000617641 HNF1AP20823 631 aa13.66□□□□□ -0.22
PCDHGC3-205ENST00000617641 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-205ENST00000617641 LYZP61626 148 aa13.66□□□□□ -0.22
PCDHGC3-205ENST00000617641 CSMD2Q7Z408 3487 aa13.66□□□□□ -0.22
PCDHGC3-205ENST00000617641 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 H7BYZ3 331 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 MSMBP08118 114 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 PLP1P60201 277 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 ANKRD39Q53RE8 183 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 FXYD5Q96DB9 178 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 MAP1AP78559 2803 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 SH2D7A6NKC9 451 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 IGHV4-38-2P0DP08 117 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 LEMD1Q68G75 181 aa13.65□□□□□ -0.22
PCDHGC3-205ENST00000617641 MEOX2P50222 304 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 CLEC12BQ2HXU8 276 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 RD3LP0DJH9 198 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 PAX1P15863 534 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 COL8A1P27658 744 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 DSCR9P59020 149 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 ANAPC16Q96DE5 110 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 HIGD1AQ9Y241 93 aa13.64□□□□□ -0.23
PCDHGC3-205ENST00000617641 GALR1P47211 349 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 FAM210BQ96KR6 192 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 C7orf69Q9H7B7 122 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 SOX21Q9Y651 276 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 OR2J3O76001 311 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 NDUFB8O95169 186 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 PFN1P07737 140 aaKnown RBP13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 ZFHX3Q15911 3703 aa13.63□□□□□ -0.23
PCDHGC3-205ENST00000617641 ATP6V0E1O15342 81 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 ECSCRQ19T08 205 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 BLNKQ8WV28 456 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 HIF1ANQ9NWT6 349 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 HELTA6NFD8 242 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 LINC01548A6NM66 108 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 K7EN84 100 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 IGHV3-23P01764 117 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 MFAP4P55083 255 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 STXBP6Q8NFX7 210 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 SGMS2Q8NHU3 365 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 PIFOQ8TCI5 191 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 TMUB1Q9BVT8 246 aa13.62□□□□□ -0.23
PCDHGC3-205ENST00000617641 B4DSR2 109 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 C9JCJ5 164 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 F8W735 103 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 GNG7O60262 68 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 FABP1P07148 127 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 GP9P14770 177 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 KRTAP10-9P60411 292 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 UNQ5815/PRO19632Q6UWF5 114 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 C5orf56Q8N8D9 126 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 SFRP2Q96HF1 295 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 BIN3Q9NQY0 253 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 TRBV24-1A0A075B6N3 115 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 CENPWQ5EE01 88 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 ZNF329Q86UD4 541 aa13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 SLC25A39Q9BZJ4 359 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 MRPL27Q9P0M9 148 aaKnown RBP13.61□□□□□ -0.23
PCDHGC3-205ENST00000617641 MDFIC2A0A1B0GVS7 189 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 TOMM40O96008 361 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 CD99P14209 185 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 SLC25A16P16260 332 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 RANP62826 216 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 Q56UQ5 140 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 C21orf62Q9NYP8 219 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 THYN1Q9P016 225 aa13.6□□□□□ -0.23
PCDHGC3-205ENST00000617641 H3BTX0 84 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 S100PP25815 95 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 GNG4P50150 75 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 FAM110DQ8TAY7 271 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 AVPP01185 164 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 IL4P05112 153 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 TEX38Q6PEX7 206 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 ZNF491Q8N8L2 437 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 ZNF48Q96MX3 618 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 MEGF9Q9H1U4 602 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
PCDHGC3-205ENST00000617641 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms