RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 RBMY1FQ15415 496 aaKnown RBP16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 TMEM128Q5BJH2 165 aa16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 MORN3Q6PF18 240 aaPredicted RBP16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 TOMM5Q8N4H5 51 aa16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 CSNK1G2-AS1Q8NCQ2 148 aa16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 OR1S1Q8NH92 325 aa16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 RAB40CQ96S21 281 aa16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 MFFQ9GZY8 342 aa16.13■□□□□ 0.17
NEDD4L-237ENST00000617539 IGHV4-28A0A0C4DH34 117 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 IFNA4P05014 189 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 AP2S1P53680 142 aaPredicted RBP16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 ZNF90Q03938 601 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 LRTM2Q8N967 370 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 RNF125Q96EQ8 232 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 NRN1Q9NPD7 142 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 X6R8D5 127 aa16.12■□□□□ 0.17
NEDD4L-237ENST00000617539 VPS13DQ5THJ4 4388 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 DUXBA0A1W2PPF3 345 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 ZNF705EA8MWA4 302 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 AP3S2P59780 193 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 TMEM41BQ5BJD5 291 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 SIGLEC15Q6ZMC9 328 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 CCDC190Q86UF4 302 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 RPP25LQ8N5L8 163 aaKnown RBP16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 RBM38Q9H0Z9 239 aaKnown RBP16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 CLEC5AQ9NY25 188 aa16.11■□□□□ 0.17
NEDD4L-237ENST00000617539 VAMP1P23763 118 aa16.1■□□□□ 0.17
NEDD4L-237ENST00000617539 GPX4P36969 197 aaPredicted RBP16.1■□□□□ 0.17
NEDD4L-237ENST00000617539 ATP5IP56385 69 aaPredicted RBP16.1■□□□□ 0.17
NEDD4L-237ENST00000617539 ZFP92A6NM28 416 aa16.09■□□□□ 0.17
NEDD4L-237ENST00000617539 IAPPP10997 89 aa16.09■□□□□ 0.17
NEDD4L-237ENST00000617539 PPP1R1AQ13522 171 aa16.09■□□□□ 0.17
NEDD4L-237ENST00000617539 PBDC1Q9BVG4 233 aa16.09■□□□□ 0.17
NEDD4L-237ENST00000617539 IGKV1OR2-108A0A075B7D4 117 aa16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 DEDDO75618 318 aa16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 LGALS9CQ6DKI2 356 aa16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 SLC35E1Q96K37 410 aa16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 SLC25A21Q9BQT8 299 aaPredicted RBP16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 HRH4Q9H3N8 390 aa16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 SEPSECSQ9HD40 501 aaKnown RBP16.08■□□□□ 0.16
NEDD4L-237ENST00000617539 ELOA3CA0A087WX78 387 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 H3BMM0 161 aa16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 SFT2D2O95562 160 aa16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 SLC25A6P12236 298 aa16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 MIFP14174 115 aa16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 SNRPD3P62318 126 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 OR8G2PQ6IF36 304 aa16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 DEDD2Q8WXF8 326 aa16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 WDR12Q9GZL7 423 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-237ENST00000617539 PIGBOS1A0A0B4J2F0 54 aa16.06■□□□□ 0.16
NEDD4L-237ENST00000617539 CCDC160A6NGH7 325 aa16.06■□□□□ 0.16
NEDD4L-237ENST00000617539 PRSS46E5RG02 174 aa16.06■□□□□ 0.16
NEDD4L-237ENST00000617539 DEFB1P60022 68 aa16.06■□□□□ 0.16
NEDD4L-237ENST00000617539 GSG1LQ6UXU4 331 aa16.06■□□□□ 0.16
NEDD4L-237ENST00000617539 TBC1D24Q9ULP9 559 aa16.06■□□□□ 0.16
NEDD4L-237ENST00000617539 S100A5P33763 92 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 OR2F1Q13607 317 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 GDF5OSQ5U4N7 250 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 C2CD4CQ8TF44 421 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 SRRQ9GZT4 340 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 MAGT1Q9H0U3 335 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 TMED3Q9Y3Q3 217 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 DNAH10Q8IVF4 4471 aa16.05■□□□□ 0.16
NEDD4L-237ENST00000617539 SOCS3O14543 225 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 HLA-DRB4P13762 266 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 NUP62P37198 522 aaPredicted RBP16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 LYZP61626 148 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 CENPSQ8N2Z9 138 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 THAP8Q8NA92 274 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 TRGV9Q99603 122 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 HLA-DRB4X5D2U9 266 aa16.04■□□□□ 0.16
NEDD4L-237ENST00000617539 HOXB5P09067 269 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 HLA-DMBP28068 263 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 NKX2-1P43699 371 aaPredicted RBP16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 RAB11AP62491 216 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 PRR20EP86478 221 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 PRR20CP86479 221 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 PRR20DP86480 221 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 PRR20BP86481 221 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 PRR20AP86496 221 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 Q6ZTC4 211 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 XCL2Q9UBD3 114 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 CELA1Q9UNI1 258 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 DNAH6Q9C0G6 4158 aa16.03■□□□□ 0.16
NEDD4L-237ENST00000617539 WRBO00258 174 aa16.02■□□□□ 0.16
NEDD4L-237ENST00000617539 SYNGR2O43760 224 aa16.02■□□□□ 0.16
NEDD4L-237ENST00000617539 C1orf194Q5T5A4 169 aa16.02■□□□□ 0.16
NEDD4L-237ENST00000617539 GGNBP1Q5YKI7 109 aa16.02■□□□□ 0.16
NEDD4L-237ENST00000617539 PAIP2BQ9ULR5 123 aaKnown RBP16.02■□□□□ 0.16
NEDD4L-237ENST00000617539 APLNQ9ULZ1 77 aa16.02■□□□□ 0.16
NEDD4L-237ENST00000617539 SNRPGP15A8MWD9 76 aa16.01■□□□□ 0.15
NEDD4L-237ENST00000617539 C11orf94C9JXX5 98 aa16.01■□□□□ 0.15
NEDD4L-237ENST00000617539 MED6O75586 246 aa16.01■□□□□ 0.15
NEDD4L-237ENST00000617539 BAK1Q16611 211 aa16.01■□□□□ 0.15
NEDD4L-237ENST00000617539 IGLL5B9A064 214 aa16■□□□□ 0.15
NEDD4L-237ENST00000617539 ADAP1O75689 374 aa16■□□□□ 0.15
NEDD4L-237ENST00000617539 FABP1P07148 127 aa16■□□□□ 0.15
NEDD4L-237ENST00000617539 C17orf77Q96MU5 243 aa16■□□□□ 0.15
NEDD4L-237ENST00000617539 CIB3Q96Q77 187 aaPredicted RBP16■□□□□ 0.15
NEDD4L-237ENST00000617539 C1QTNF4Q9BXJ3 329 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms