RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 LINC01619G3V211 115 aa13.4□□□□□ -0.26
TRAPPC3-209ENST00000616395 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
TRAPPC3-209ENST00000616395 IL34Q6ZMJ4 242 aa13.4□□□□□ -0.26
TRAPPC3-209ENST00000616395 LFNGQ8NES3 379 aa13.4□□□□□ -0.26
TRAPPC3-209ENST00000616395 G3V318 75 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 IGLV1-40P01703 118 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 RNASE2P10153 161 aaKnown RBP13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 RAB9AP51151 201 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 NDPQ00604 133 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 BTNL8Q6UX41 500 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 ZNF562Q6V9R5 426 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 ZNF114Q8NC26 417 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 SRSF12Q8WXF0 261 aaKnown RBP13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 TPSG1Q9NRR2 321 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 IGHV4OR15-8A0A075B7B6 117 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 A0A087WW49 117 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 ATP6V0E1O15342 81 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 DEFA4P12838 97 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 FXYD3Q14802 87 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 BSXQ3C1V8 233 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 Q6ZRG5 221 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 MARC2Q969Z3 335 aa13.39□□□□□ -0.27
TRAPPC3-209ENST00000616395 IGHV7-81A0A0B4J1V7 117 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 RAB19A4D1S5 217 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 FCN1O00602 326 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 SCGB2A1O75556 95 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 IGLV1-51P01701 117 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 HLA-DRB1P01911 266 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 MYOD1P15172 320 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 ACOT6Q3I5F7 207 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 UQCC3Q6UW78 93 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 OR10W1Q8NGF6 305 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 TMEM68Q96MH6 324 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 SH3BGRL3Q9H299 93 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 TUBA4BQ9H853 241 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 THYN1Q9P016 225 aa13.38□□□□□ -0.27
TRAPPC3-209ENST00000616395 OPRK1P41145 380 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 PJVKQ0ZLH3 352 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 TMEM41BQ5BJD5 291 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 RPP25LQ8N5L8 163 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 GATAD1Q8WUU5 269 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 PCNPQ8WW12 178 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 PBDC1Q9BVG4 233 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 HRH4Q9H3N8 390 aa13.37□□□□□ -0.27
TRAPPC3-209ENST00000616395 H2AFB1P0C5Y9 115 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 WT1-ASQ06250 92 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 C10orf55Q5SWW7 151 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 RSG1Q9BU20 258 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 NPCDR1Q9BY65 106 aa13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 F11RQ9Y624 299 aaKnown RBP13.36□□□□□ -0.27
TRAPPC3-209ENST00000616395 IGLC7A0M8Q6 106 aa13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 MT-CO2P00403 227 aa13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 FABP1P07148 127 aa13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 LGALS1P09382 135 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 FFAR4Q5NUL3 377 aa13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 EIF4E3Q8N5X7 224 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 FAM103A1Q9BTL3 118 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 ELOVL1Q9BW60 279 aa13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 ACTR3CQ9C0K3 210 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC3-209ENST00000616395 TRAV41A0A0B4J266 112 aa13.34□□□□□ -0.27
TRAPPC3-209ENST00000616395 PRSS46E5RG02 174 aa13.34□□□□□ -0.27
TRAPPC3-209ENST00000616395 HIST1H1BP16401 226 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-209ENST00000616395 CX3CL1P78423 397 aa13.34□□□□□ -0.27
TRAPPC3-209ENST00000616395 MISP3Q96FF7 219 aa13.34□□□□□ -0.27
TRAPPC3-209ENST00000616395 A0A1W2PPV4 95 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 BRI3O95415 125 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 IFNA1P01562 189 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 M6PRP20645 277 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 SELENOTP62341 195 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 MRGPRG-AS1Q2M3A8 158 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
TRAPPC3-209ENST00000616395 HECTD4Q9Y4D8 3996 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 DNAH10Q8IVF4 4471 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 NPIPB5A8MRT5 1133 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 TEX22C9J3V5 150 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 KRBOX1C9JBD0 128 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 RPL29P47914 159 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 SSBP2P81877 361 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 PEA15Q15121 130 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 LINC00322Q6ZN03 302 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 OR10G4Q8NGN3 311 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 OR10G9Q8NGN4 311 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 OR10G7Q8NGN6 311 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 TMEM170AQ8WVE7 144 aa13.32□□□□□ -0.28
TRAPPC3-209ENST00000616395 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 MFSD2BA6NFX1 497 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 E7EUB6 86 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 AGPAT2O15120 278 aa13.31□□□□□ -0.28
TRAPPC3-209ENST00000616395 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms