RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	MGAT4C	Q9UBM8	478 aa		13.81	□□□□□ -0.2
CADM1-222	ENST00000616271	IGHV3OR16-13	A0A075B7E8	117 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	IGHV3-74	A0A0B4J1X5	117 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	DEDD	O75618	318 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	APOH	P02749	345 aa	Predicted RBP	13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	CAV2	P51636	162 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	H2BFS	P57053	126 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	ZNF90	Q03938	601 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	USF2	Q15853	346 aa	Predicted RBP	13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	RNF125	Q96EQ8	232 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	B9D2	Q9BPU9	175 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	NEURL2	Q9BR09	285 aa		13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	LYRM2	Q9NU23	88 aa	Predicted RBP	13.8	□□□□□ -0.2
CADM1-222	ENST00000616271	SMCO3	A2RU48	225 aa		13.79	□□□□□ -0.2
CADM1-222	ENST00000616271	CD7	P09564	240 aa		13.79	□□□□□ -0.2
CADM1-222	ENST00000616271	RRAS2	P62070	204 aa	Predicted RBP	13.79	□□□□□ -0.2
CADM1-222	ENST00000616271	FAM90A2P	Q658T7	463 aa		13.79	□□□□□ -0.2
CADM1-222	ENST00000616271	GGACT	Q9BVM4	153 aa		13.79	□□□□□ -0.2
CADM1-222	ENST00000616271	RABAC1	Q9UI14	185 aa		13.79	□□□□□ -0.2
CADM1-222	ENST00000616271		U3KQE9	123 aa		13.79	□□□□□ -0.2
CADM1-222	ENST00000616271	FAM24A	A6NFZ4	105 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271		A8MZ25	164 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	CFD	P00746	253 aa	Predicted RBP	13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	RLN2	P04090	185 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	IGHV4-30-4	P0DP06	118 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	ARL16	Q0P5N6	197 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	TCF24	Q7RTU0	167 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	GRAMD2B	Q96HH9	432 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	NPVF	Q9HCQ7	196 aa		13.78	□□□□□ -0.2
CADM1-222	ENST00000616271	IGHV3-66	A0A0C4DH42	116 aa		13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	OR4C46	A6NHA9	309 aa		13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	NUP62	P37198	522 aa	Predicted RBP	13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	P2RY1	P47900	373 aa		13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	SLC38A11	Q08AI6	406 aa		13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	LRRC37A5P	Q49AS3	106 aa		13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	STX12	Q86Y82	276 aa		13.77	□□□□□ -0.21
CADM1-222	ENST00000616271	IGSF23	A1L1A6	192 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271		E5RGE8	158 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	EIF2B2	P49770	351 aa	Known RBP	13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	SULT1A1	P50225	295 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	LYZ	P61626	148 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	OR2F1	Q13607	317 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	OXA1L	Q15070	435 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	LILRB2	Q8N423	598 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	TMEM252	Q8N6L7	170 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	BPIFC	Q8NFQ6	507 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	PPP1R1C	Q8WVI7	109 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	PBDC1	Q9BVG4	233 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	C19orf73	Q9NVV2	129 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	PFDN2	Q9UHV9	154 aa		13.76	□□□□□ -0.21
CADM1-222	ENST00000616271	DFFB	O76075	338 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	CST7	O76096	145 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	FRMD6-AS1	P0C7T7	363 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	PET100	P0DJ07	73 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	PAFAH1B2	P68402	229 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	HBG1	P69891	147 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	HBG2	P69892	147 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	TEPP	Q6URK8	271 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	C16orf54	Q6UWD8	224 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	CYP2G1P	Q6ZSU1	146 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	MED28	Q9H204	178 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	OR5AC2	Q9NZP5	309 aa		13.75	□□□□□ -0.21
CADM1-222	ENST00000616271	TRAV2	A0A0B4J234	112 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	OR11H12	B2RN74	326 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271		H0YIZ8	118 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	SELENOT	P62341	195 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	TMEM217	Q8N7C4	229 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	GLMP	Q8WWB7	406 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	FAM110A	Q9BQ89	295 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	SLC45A2	Q9UMX9	530 aa		13.74	□□□□□ -0.21
CADM1-222	ENST00000616271	IGKV3-7	A0A075B6H7	116 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	HELT	A6NFD8	242 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	BUB3	O43684	328 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	MPC2	O95563	127 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	S100A11	P31949	105 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	DEFB125	Q8N687	156 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	SLC25A31	Q9H0C2	315 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	WFDC10A	Q9H1F0	79 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	TUBA4B	Q9H853	241 aa		13.73	□□□□□ -0.21
CADM1-222	ENST00000616271	CXCL3	P19876	107 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	GATA2	P23769	480 aa	Predicted RBP	13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	RPL11	P62913	178 aa	Known RBP	13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	FCN2	Q15485	313 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	ATP6V1F	Q16864	119 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	VWC2	Q2TAL6	325 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	GBGT1	Q8N5D6	347 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	TMEM147	Q9BVK8	224 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	MS4A6A	Q9H2W1	248 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	SRD5A3	Q9H8P0	318 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	UQCC1	Q9NVA1	299 aa		13.72	□□□□□ -0.21
CADM1-222	ENST00000616271	DNASE2	O00115	360 aa	Predicted RBP	13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	S100A7	P31151	101 aa		13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	TFPI2	P48307	235 aa		13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	AP2S1	P53680	142 aa	Predicted RBP	13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	CMC4	P56277	68 aa	Predicted RBP	13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	BAX	Q07812	192 aa		13.71	□□□□□ -0.21
CADM1-222	ENST00000616271	ODF3L2	Q3SX64	289 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms