RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NCR2O95944 276 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 DUX5Q96PT3 197 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 EFEMP2O95967 443 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 Q6ZRM9 215 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 MESP1Q9BRJ9 268 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 RALGAPA1Q6GYQ0 2036 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 F2Z2F3 143 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 PAX1P15863 534 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 FAM27E3Q08E93 113 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 CLEC19AQ6UXS0 136 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 LHFPL4Q7Z7J7 247 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 TRAV12-3A0A0B4J271 114 aa15.57■□□□□ 0.08
SPAST-203ENST00000615843 LILRA1O75019 489 aa15.56■□□□□ 0.08
SPAST-203ENST00000615843 IGLV3-19P01714 112 aa15.56■□□□□ 0.08
SPAST-203ENST00000615843 LOC102723996A0A087X1L8 192 aa15.56■□□□□ 0.08
SPAST-203ENST00000615843 TCRAP04437 139 aa15.56■□□□□ 0.08
SPAST-203ENST00000615843 NUP37Q8NFH4 326 aa15.56■□□□□ 0.08
SPAST-203ENST00000615843 CD300EQ496F6 205 aaPredicted RBP15.56■□□□□ 0.08
SPAST-203ENST00000615843 TMEM42Q69YG0 159 aa15.56■□□□□ 0.08
SPAST-203ENST00000615843 TRBV6-6A0A0A6YYG2 114 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 PSPNO60542 156 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 Q6ZS49 121 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 TRAV3A0A0B4J244 114 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 C15orf62A8K5M9 175 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 IFI27P40305 119 aaPredicted RBP15.55■□□□□ 0.08
SPAST-203ENST00000615843 TRBV7-9A0A0J9YWB2 115 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 ZNF138P52744 262 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 MCRIP2Q9BUT9 160 aaKnown RBP15.55■□□□□ 0.08
SPAST-203ENST00000615843 NPIPB5A8MRT5 1133 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 FXYD7P58549 80 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 LAGE3Q14657 143 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 KLF17Q5JT82 389 aaPredicted RBP15.55■□□□□ 0.08
SPAST-203ENST00000615843 CLEC2AQ6UVW9 174 aa15.55■□□□□ 0.08
SPAST-203ENST00000615843 NBR2O15453 112 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 APOBEC3AP31941 199 aaPredicted RBP15.54■□□□□ 0.08
SPAST-203ENST00000615843 ERG28Q9UKR5 140 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 ARHGEF17Q96PE2 2063 aaPredicted RBP15.54■□□□□ 0.08
SPAST-203ENST00000615843 CLPSP04118 112 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 PRB4P10163 310 aaPredicted RBP15.54■□□□□ 0.08
SPAST-203ENST00000615843 EXOC3-AS1Q8N2X6 119 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 FDCSPQ8NFU4 85 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 LTBP4Q8N2S1 1624 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 PRTN3P24158 256 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 TMPRSS3P57727 454 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 LYZL1Q6UWQ5 148 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 TMEM101Q96IK0 257 aa15.54■□□□□ 0.08
SPAST-203ENST00000615843 PLNP26678 52 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 RNF182Q8N6D2 247 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 TDGF1P13385 188 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 C10orf55Q5SWW7 151 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 C17orf100A8MU93 164 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 IGLC2P0DOY2 106 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 IGLC3P0DOY3 106 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 CNTFRP26992 372 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 GAGE1Q13065 139 aa15.53■□□□□ 0.08
SPAST-203ENST00000615843 GFRA3O60609 400 aa15.52■□□□□ 0.08
SPAST-203ENST00000615843 ADAMTSL5Q6ZMM2 481 aa15.52■□□□□ 0.08
SPAST-203ENST00000615843 FOXG1P55316 489 aaPredicted RBP15.52■□□□□ 0.08
SPAST-203ENST00000615843 DLX4Q92988 240 aaPredicted RBP15.52■□□□□ 0.08
SPAST-203ENST00000615843 PMS2P5A8MQ11 134 aa15.52■□□□□ 0.07
SPAST-203ENST00000615843 TMEM133Q9H2Q1 129 aa15.52■□□□□ 0.07
SPAST-203ENST00000615843 YAE1D1Q9NRH1 226 aa15.52■□□□□ 0.07
SPAST-203ENST00000615843 LINC00473A8K010 186 aa15.52■□□□□ 0.07
SPAST-203ENST00000615843 LSM4Q9Y4Z0 139 aaKnown RBP15.52■□□□□ 0.07
SPAST-203ENST00000615843 PSG3Q16557 428 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 Q6ZWC4 215 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 TMEM190Q8WZ59 177 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 TRAV21A0A0B4J279 112 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 SMAD7O15105 426 aaKnown RBP15.51■□□□□ 0.07
SPAST-203ENST00000615843 C9orf106Q8NAJ2 232 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 IGHV3OR16-10A0A075B7F0 116 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 SCRT1Q9BWW7 348 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 TOMM7Q9P0U1 55 aa15.51■□□□□ 0.07
SPAST-203ENST00000615843 C18orf32Q8TCD1 76 aa15.5■□□□□ 0.07
SPAST-203ENST00000615843 RPUSD1Q9UJJ7 312 aaKnown RBP15.5■□□□□ 0.07
SPAST-203ENST00000615843 ITGB1BP1O14713 200 aa15.5■□□□□ 0.07
SPAST-203ENST00000615843 BSPH1Q075Z2 132 aa15.5■□□□□ 0.07
SPAST-203ENST00000615843 ANAPC10Q9UM13 185 aa15.5■□□□□ 0.07
SPAST-203ENST00000615843 FAM231BA6NCW3 169 aa15.5■□□□□ 0.07
SPAST-203ENST00000615843 KLF2Q9Y5W3 355 aaPredicted RBP15.5■□□□□ 0.07
SPAST-203ENST00000615843 IGKV2-40A0A087WW87 121 aaPredicted RBP15.5■□□□□ 0.07
SPAST-203ENST00000615843 IGKV2D-40P01614 121 aaPredicted RBP15.5■□□□□ 0.07
SPAST-203ENST00000615843 CD7P09564 240 aa15.5■□□□□ 0.07
SPAST-203ENST00000615843 PRB3Q04118 309 aaPredicted RBP15.5■□□□□ 0.07
SPAST-203ENST00000615843 GGNQ86UU5 652 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 SLC25A39Q9BZJ4 359 aaPredicted RBP15.49■□□□□ 0.07
SPAST-203ENST00000615843 TMEM155Q4W5P6 130 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 ZC2HC1BQ5TFG8 222 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 CHAC1Q9BUX1 264 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 SPINK8P0C7L1 97 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 ASCL4Q6XD76 172 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 TET1Q8NFU7 2136 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 TNS1Q9HBL0 1735 aaKnown RBP15.49■□□□□ 0.07
SPAST-203ENST00000615843 SRRM5B3KS81 715 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 ATXN8Q156A1 80 aa15.49■□□□□ 0.07
SPAST-203ENST00000615843 TRAV8-1A0A0A6YYK1 113 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 GLMPQ8WWB7 406 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 RBMY1BA6NDE4 496 aaKnown RBP15.48■□□□□ 0.07
SPAST-203ENST00000615843 RBMY1EA6NEQ0 496 aaKnown RBP15.48■□□□□ 0.07
SPAST-203ENST00000615843 C9orf172C9J069 976 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms