RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CXCL1P09341 107 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 LMO1P25800 156 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 COQ2Q96H96 371 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 SRSF8Q9BRL6 282 aaKnown RBP12.09□□□□□ -0.47
SNPH-203ENST00000614659 RNASE7Q9H1E1 156 aaKnown RBP12.09□□□□□ -0.47
SNPH-203ENST00000614659 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
SNPH-203ENST00000614659 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 NDUFS6O75380 124 aaKnown RBP12.09□□□□□ -0.47
SNPH-203ENST00000614659 PPBPP02775 128 aa12.09□□□□□ -0.47
SNPH-203ENST00000614659 H7C1H1 209 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 DNAL4O96015 105 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 MAJINQ3KP22 176 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 VMO1Q7Z5L0 202 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 GAFA1Q96PS6 74 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
SNPH-203ENST00000614659 CACNG7P62955 275 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 ZNF474Q6S9Z5 364 aaPredicted RBP12.08□□□□□ -0.48
SNPH-203ENST00000614659 TNFSF13O75888 250 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
SNPH-203ENST00000614659 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
SNPH-203ENST00000614659 MRPL52Q86TS9 123 aaKnown RBP12.07□□□□□ -0.48
SNPH-203ENST00000614659 PSMB11A5LHX3 300 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 ADCYAP1P18509 176 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 ZNF56Q15929 161 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 PROK2Q9HC23 129 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 ARHGEF17Q96PE2 2063 aaPredicted RBP12.07□□□□□ -0.48
SNPH-203ENST00000614659 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
SNPH-203ENST00000614659 AMBPP02760 352 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 SCGB3A1Q96QR1 104 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
SNPH-203ENST00000614659 LYNX1G3V0Z9 82 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 LYNX1P0DP58 116 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
SNPH-203ENST00000614659 PSG8Q9UQ74 426 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 C15orf62A8K5M9 175 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 IGHV2-26A0A0B4J1V2 119 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 A0A1W2PRX2 142 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 H0YJW9 148 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 KIF26BQ2KJY2 2108 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 SIGMAR1Q99720 223 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 KLF2Q9Y5W3 355 aaPredicted RBP12.06□□□□□ -0.48
SNPH-203ENST00000614659 MLNRO43193 412 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 C3orf56Q8N813 242 aa12.06□□□□□ -0.48
SNPH-203ENST00000614659 FREM3P0C091 2139 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 NPFFO15130 113 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 TMEM50AO95807 157 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 TFF1P04155 84 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
SNPH-203ENST00000614659 IGKV1D-17A0A075B6S4 117 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 LINC00473A8K010 186 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 TYMSP04818 313 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 PYYP10082 97 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 TDGF1P13385 188 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 GNG5P63218 68 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 ORAOV1Q8WV07 137 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 RNF138Q8WVD3 245 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 TRAV41A0A0B4J266 112 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 CLEC19AQ6UXS0 136 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 ITLN2Q8WWU7 325 aaPredicted RBP12.05□□□□□ -0.48
SNPH-203ENST00000614659 DLEU1O43261 78 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 WISP1O95388 367 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 LINC00614P0C842 121 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 ZNF585BQ52M93 769 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
SNPH-203ENST00000614659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.04□□□□□ -0.48
SNPH-203ENST00000614659 MSMBP08118 114 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 LEPP41159 167 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 F2Z2F3 143 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 FAM90A2PQ658T7 463 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 Q8TCH9 128 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 NXT2Q9NPJ8 142 aaKnown RBP12.04□□□□□ -0.48
SNPH-203ENST00000614659 RIPPLY3P57055 190 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 SEC11AP67812 179 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 TIMM23O14925 209 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 MRAP2Q96G30 205 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 ZNF581Q9P0T4 197 aa12.04□□□□□ -0.48
SNPH-203ENST00000614659 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 GATA4P43694 442 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 PRR30Q53SZ7 412 aaPredicted RBP12.03□□□□□ -0.48
SNPH-203ENST00000614659 PLXNB3Q9ULL4 1909 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
SNPH-203ENST00000614659 STHQ8IWL8 128 aa12.03□□□□□ -0.48
SNPH-203ENST00000614659 MDC1Q14676 2089 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms