RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 LINC00114Q6XXX2 140 aa11.52□□□□□ -0.56
CHD1-212ENST00000614616 C17orf98A8MV24 154 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 CCL3P10147 92 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 SLAQ13239 276 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 DYNLRB2Q8TF09 96 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 TCRBV4S1A1TA0A5B7 111 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 CEND1Q8N111 149 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 GFRA4Q9GZZ7 299 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 FAM89BQ8N5H3 189 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 PEAR1Q5VY43 1037 aaPredicted RBP11.52□□□□□ -0.57
CHD1-212ENST00000614616 C3AR1Q16581 482 aa11.52□□□□□ -0.57
CHD1-212ENST00000614616 SIVA1O15304 175 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 OSR1Q8TAX0 266 aaPredicted RBP11.51□□□□□ -0.57
CHD1-212ENST00000614616 C1orf43Q9BWL3 253 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 C9JQL5 133 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 IGKV3D-15A0A087WSY6 115 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 TM4SF5O14894 197 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 CEACAM4O75871 244 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 KLHDC3Q9BQ90 382 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 TRAV17A0A0B4J275 112 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 RPP25LQ8N5L8 163 aaKnown RBP11.51□□□□□ -0.57
CHD1-212ENST00000614616 PILRBQ9UKJ0 227 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
CHD1-212ENST00000614616 MBNL3Q9NUK0 354 aaKnown RBP11.5□□□□□ -0.57
CHD1-212ENST00000614616 TMEM74BQ9NUR3 256 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 LILRA1O75019 489 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 AGFG2O95081 481 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 TM4SF4P48230 202 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 ABHD17AQ96GS6 310 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
CHD1-212ENST00000614616 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
CHD1-212ENST00000614616 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 MAGEA5P43359 124 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 PAQR4Q8N4S7 273 aaPredicted RBP11.5□□□□□ -0.57
CHD1-212ENST00000614616 TMEM171Q8WVE6 324 aa11.5□□□□□ -0.57
CHD1-212ENST00000614616 FOXS1O43638 330 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 CCL1P22362 96 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 MORN2Q502X0 79 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 ETDBQ3ZM63 59 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 SCARF2Q96GP6 870 aaPredicted RBP11.49□□□□□ -0.57
CHD1-212ENST00000614616 R3HDMLQ9H3Y0 253 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 IGKV3D-11A0A0A0MRZ8 115 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 IGKV3-11P04433 115 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 NDUFC2O95298 119 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 LINC00271P0C7V0 271 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 SMIM10L1P0DMW3 83 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 NPPCP23582 126 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 SMIM10Q96HG1 83 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 SMIM20Q8N5G0 67 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
CHD1-212ENST00000614616 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
CHD1-212ENST00000614616 PILRAQ9UKJ1 303 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 TIAF1O95411 115 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
CHD1-212ENST00000614616 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 BMPERQ8N8U9 685 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 DDB2Q92466 427 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 R4GN57 208 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 hCG_38984A0A1B0GV85 526 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 CCL13Q99616 98 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 PDLIM4P50479 330 aa11.48□□□□□ -0.57
CHD1-212ENST00000614616 ACP7Q6ZNF0 438 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 C18orf32Q8TCD1 76 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 GUSBP11Q6P575 273 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 NMSQ5H8A3 153 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 NABP1Q96AH0 204 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 ZNF319Q9P2F9 582 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 G3V4G9 280 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 J3KT08 172 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
CHD1-212ENST00000614616 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
CHD1-212ENST00000614616 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 FOXH1O75593 365 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 C8orf46Q8TAG6 207 aa11.47□□□□□ -0.57
CHD1-212ENST00000614616 IGLC7A0M8Q6 106 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 IGLL1P15814 213 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 ZNF826PQ6ZT77 177 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 A0A0J9YW62 118 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 H3BMG7 143 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 TMEM258P61165 79 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 TREML4Q6UXN2 200 aa11.46□□□□□ -0.57
CHD1-212ENST00000614616 VGLL1Q99990 258 aa11.46□□□□□ -0.58
CHD1-212ENST00000614616 ATP5G2Q06055 141 aa11.46□□□□□ -0.58
CHD1-212ENST00000614616 OR9G1Q8NH87 305 aa11.46□□□□□ -0.58
CHD1-212ENST00000614616 SPSB3Q6PJ21 355 aa11.45□□□□□ -0.58
CHD1-212ENST00000614616 J3QW42 95 aa11.45□□□□□ -0.58
CHD1-212ENST00000614616 CXCL10P02778 98 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms