RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 SUB1P53999 127 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCL3-205ENST00000613928 RPL15P61313 204 aaKnown RBP6.63□□□□□ -1.35
CCL3-205ENST00000613928 PLGLAQ15195 96 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 C5orf64Q2M2E5 130 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 RUSC1-AS1Q66K80 236 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 SPATA3Q8NHX4 192 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 RNASEH2CQ8TDP1 164 aaKnown RBP6.63□□□□□ -1.35
CCL3-205ENST00000613928 SSMEM1Q8WWF3 244 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 CACNG8Q8WXS5 425 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 PBDC1Q9BVG4 233 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
CCL3-205ENST00000613928 SLC39A9Q9NUM3 307 aa6.63□□□□□ -1.35
CCL3-205ENST00000613928 COL6A5A8TX70 2615 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 IGKV1D-37A0A075B6S9 117 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 CYB5BO43169 146 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 IGHV1-69P01742 117 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 MSMBP08118 114 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 TMEM11P17152 192 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 CDC34P49427 236 aaPredicted RBP6.62□□□□□ -1.35
CCL3-205ENST00000613928 PPT1P50897 306 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 B2MP61769 119 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 DEFA5Q01523 94 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 Q8N9W7 124 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 RXFP4Q8TDU9 374 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 SLC35E1Q96K37 410 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
CCL3-205ENST00000613928 ELOVL1Q9BW60 279 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 SMDT1Q9H4I9 107 aa6.62□□□□□ -1.35
CCL3-205ENST00000613928 F11RQ9Y624 299 aaKnown RBP6.62□□□□□ -1.35
CCL3-205ENST00000613928 PLXNB1O43157 2135 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 TRAV40A0A0B4J280 105 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 CNIH1O95406 144 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 LY6G6DO95868 133 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 IGHV3-48P01763 117 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 FBP1P09467 338 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 CTRB1P17538 263 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 GATA2P23769 480 aaPredicted RBP6.61□□□□□ -1.35
CCL3-205ENST00000613928 BRS3P32247 399 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 CX3CL1P78423 397 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 RAB31Q13636 194 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 FXYD3Q14802 87 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 DEFB113Q30KQ7 82 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 KHDC3LQ587J8 217 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 ASPHD1Q5U4P2 390 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 SPATA31B1PQ5VZV4 182 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 CTRB2Q6GPI1 263 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 TMEM88Q6PEY1 159 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 THAP8Q8NA92 274 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 OR1P1Q8NH06 330 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 ACY3Q96HD9 319 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 SLC25A33Q9BSK2 321 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 FAM103A1Q9BTL3 118 aaKnown RBP6.61□□□□□ -1.35
CCL3-205ENST00000613928 SLC35B3Q9H1N7 401 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 KCNIP2Q9NS61 270 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 BEX4Q9NWD9 120 aaPredicted RBP6.61□□□□□ -1.35
CCL3-205ENST00000613928 GNG13Q9P2W3 67 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 SOX21Q9Y651 276 aaPredicted RBP6.61□□□□□ -1.35
CCL3-205ENST00000613928 FBN1P35555 2871 aaKnown RBP6.61□□□□□ -1.35
CCL3-205ENST00000613928 STAB1Q9NY15 2570 aa6.61□□□□□ -1.35
CCL3-205ENST00000613928 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 ZFP92A6NM28 416 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 NCBP2LA6PVI3 153 aaKnown RBP6.6□□□□□ -1.35
CCL3-205ENST00000613928 B4DSR2 109 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 DNASE2O00115 360 aaPredicted RBP6.6□□□□□ -1.35
CCL3-205ENST00000613928 HSPB1P04792 205 aaKnown RBP6.6□□□□□ -1.35
CCL3-205ENST00000613928 FAM106CPP0CH98 169 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 STAG3L2P0CL84 134 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 STAG3L3P0CL85 134 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 IGHV4-38-2P0DP08 117 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 BCL2P10415 239 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 NPBWR1P48145 328 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 PCP4P48539 62 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 RND2P52198 227 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
CCL3-205ENST00000613928 NDPQ00604 133 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 TMEM249Q2WGJ8 235 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 KLF17Q5JT82 389 aaPredicted RBP6.6□□□□□ -1.35
CCL3-205ENST00000613928 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 BRD3OSQ6XYD6 125 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 CYP2G1PQ6ZSU1 146 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 LRRC75A-AS1Q8N1F1 130 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 SVBPQ8N300 66 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 PIFOQ8TCI5 191 aa6.6□□□□□ -1.35
CCL3-205ENST00000613928 NKX6-2Q9C056 277 aaPredicted RBP6.6□□□□□ -1.35
CCL3-205ENST00000613928 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 A0A0U1RQK1 487 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 A0A1W2PPV4 95 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 TCRBV4S1A1TA0A5B7 111 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 PSMB11A5LHX3 300 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 INAFM1C9JVW0 142 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 I3L2K1 104 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 CORTO00230 105 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 NUDT3O95989 172 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 MT-CO2P00403 227 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 IFNA1P01562 189 aa6.59□□□□□ -1.35
CCL3-205ENST00000613928 LOXL1Q08397 574 aaPredicted RBP6.59□□□□□ -1.35
CCL3-205ENST00000613928 BTN1A1Q13410 526 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms