RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZNF664Q8N3J9 261 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 PRRX1P54821 245 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 LY6DQ14210 128 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 IBA57Q5T440 356 aaKnown RBP11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 YPEL3P61236 119 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 SERF1AO75920 110 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 NEU1Q99519 415 aa11.22□□□□□ -0.61
PCDHGA3-202ENST00000612467 TCAPO15273 167 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 GCGP01275 180 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 G0S2P27469 103 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 MMDQ15546 238 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 TEX45Q8NA69 505 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
PCDHGA3-202ENST00000612467 CDKN1AP38936 164 aa11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 LYZP61626 148 aa11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 USF2Q15853 346 aaPredicted RBP11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 OR8B3Q8NGG8 313 aa11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 OR8B2Q96RD0 313 aa11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 C19orf24Q9BVV8 132 aa11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 RNF114Q9Y508 228 aa11.21□□□□□ -0.62
PCDHGA3-202ENST00000612467 PGPA6NDG6 321 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 PEX7O00628 323 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 CNIH1O95406 144 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 CRYGCP07315 174 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 BPIFB3P59826 476 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 BCL6BQ8N143 479 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 SCGB1D1O95968 90 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 RBP4P02753 201 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 CRISP2P16562 243 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 TMEM68Q96MH6 324 aa11.2□□□□□ -0.62
PCDHGA3-202ENST00000612467 TRAV8-1A0A0A6YYK1 113 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 A6NNC1 897 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 PSG1P11464 419 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 PKIAP61925 76 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 LINC00322Q6ZN03 302 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 SSX8Q7RTT4 187 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 DYNAPQ8N1N2 210 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 LY96Q9Y6Y9 160 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 LY6LH3BQJ8 138 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 EREGO14944 169 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 NHLH1Q02575 133 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 KLRB1Q12918 225 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 HES1Q14469 280 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 RCHY1Q96PM5 261 aa11.19□□□□□ -0.62
PCDHGA3-202ENST00000612467 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 OR5R1Q8NH85 324 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 GNB4Q9HAV0 340 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 OSTCQ9NRP0 149 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 ARL2-SNX15V9GYD0 113 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 LIPFP07098 398 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 CX3CL1P78423 397 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 TMEM136Q6ZRR5 245 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 Q6ZWC4 215 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 MS4A10Q96PG2 267 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 CDC42EP3Q9UKI2 254 aa11.18□□□□□ -0.62
PCDHGA3-202ENST00000612467 NBEAP1P0C6P0 100 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 FBXL19-AS1Q494R0 122 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 EXOC3-AS1Q8N2X6 119 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 HYPMO75409 117 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 SELENOTP62341 195 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 PERPQ96FX8 193 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 SPG11Q96JI7 2443 aa11.17□□□□□ -0.62
PCDHGA3-202ENST00000612467 TSTD3H0UI37 97 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 GP9P14770 177 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 MYCNOSP40205 109 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 GPR6P46095 362 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 IQCJQ1A5X6 159 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 TNFRSF14Q92956 283 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 RNF2Q99496 336 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 TRGV9Q99603 122 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 CSMD2Q7Z408 3487 aa11.16□□□□□ -0.62
PCDHGA3-202ENST00000612467 I3L2K1 104 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms