RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 KLK5Q9Y337 293 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 HSPE1-MOB4S4R3N1 261 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 MYH7P12883 1935 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 MYOM2P54296 1465 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CAMSAP2Q08AD1 1489 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CECR2Q9BXF3 1484 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 SYNJ1O43426 1573 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 FER1L6Q2WGJ9 1857 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 CDK5RAP2Q96SN8 1893 aa2.18□□□□□ -2.06
SMCHD1-213ENST00000609587 PHIPQ8WWQ0 1821 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 PLXNB3Q9ULL4 1909 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 FANCMQ8IYD8 2048 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 TRBV20OR9-2A0A075B6H5 130 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1-12A0A0C4DH73 117 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 H3BQF6 201 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF73O43830 326 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 MPC2O95563 127 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1D-12P01611 117 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 MT-ND4LP03901 98 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 PAEPP09466 180 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 SCGB1C2P0DMR2 95 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 CA7P43166 264 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 QRFPP83859 136 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 ATP5G2Q06055 141 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 HSD52Q0P140 79 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 COL5A1-AS1Q5SY13 56 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 ZDHHC22Q8N966 263 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 SCGB1C1Q8TD33 95 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 NAT14Q8WUY8 206 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 BORCS8Q96FH0 119 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 B9D2Q9BPU9 175 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 SHANK2-AS3Q9BTD1 123 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 EFCAB1Q9HAE3 211 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 CBLN4Q9NTU7 201 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 RNF11Q9Y3C5 154 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 IER3IP1Q9Y5U9 82 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 CCDC18Q5T9S5 1454 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 FRMPD1Q5SYB0 1578 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 CUL7Q14999 1698 aa2.17□□□□□ -2.06
SMCHD1-213ENST00000609587 RALGAPA2Q2PPJ7 1873 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 GLI3P10071 1580 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 RPRD2Q5VT52 1461 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 TRAV9-1A0A075B6T8 112 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 IGHV3OR15-7A0A075B7D8 119 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 IGHV1-58A0A0C4DH39 117 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 B4DEV8 164 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 C9JCJ5 164 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 PLA2G10O15496 165 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 HRASP01112 189 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 KRASP01116 189 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 IGHV1-46P01743 117 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV4-1P06312 121 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 HIST1H1DP16402 221 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 CRHBPP24387 322 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 RPL22P35268 128 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 FOXA3P55318 350 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 DIAPH2-AS1Q14236 149 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM241Q24JQ0 296 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 LGALS9BQ3B8N2 356 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 HSD17B12Q53GQ0 312 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 PYY3Q5JQD4 70 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 BCL2L15Q5TBC7 163 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 FAM104BQ5XKR9 115 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 LGALS9CQ6DKI2 356 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 RPS19BP1Q86WX3 136 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 MMGT1Q8N4V1 131 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 OR5H2Q8NGV7 314 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 H1FXQ92522 213 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 SNRNP25Q9BV90 132 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 C1QTNF6Q9BXI9 259 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 MRPL32Q9BYC8 188 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM191AQ9H0A3 160 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF286AQ9HBT8 521 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 RPRMQ9NS64 109 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 TAC3Q9UHF0 121 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 MPC1Q9Y5U8 109 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 KDM5DQ9BY66 1539 aa2.16□□□□□ -2.06
SMCHD1-213ENST00000609587 THOC2Q8NI27 1593 aaKnown RBP2.15□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV2-24A0A0C4DH68 120 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 C19orf84I3L1E1 186 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 TAX1BP3O14907 124 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 TNFP01375 233 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 C1QAP02745 245 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 CD7P09564 240 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 AKAIN1P0CW23 69 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 INAFM2P0DMQ5 153 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 GABARAPL2P60520 117 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 CCL20P78556 96 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 PLGLB1Q02325 96 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 MSMO1Q15800 293 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 RPL22L1Q6P5R6 122 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF767PQ75MW2 155 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 GKN2Q86XP6 184 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 OR8A1Q8NGG7 326 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 OR5C1Q8NGR4 320 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 OR10AC1Q8NH08 325 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 PPTC7Q8NI37 304 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 LCN9Q8WX39 176 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms