RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TRAV5A0A0B4J249 113 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 hADV38S2A0JD32 116 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 M0QXV9 152 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 DUX1O43812 170 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 CSN1S1P47710 185 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 CFHR1Q03591 330 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 ZNF502Q8TBZ5 544 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 MBNL2Q5VZF2 373 aaKnown RBP10.22□□□□□ -0.77
CTCFL-218ENST00000608440 PRSS3P2Q8NHM4 247 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 KLF13Q9Y2Y9 288 aaPredicted RBP10.22□□□□□ -0.77
CTCFL-218ENST00000608440 NCKAP5O14513 1909 aa10.22□□□□□ -0.77
CTCFL-218ENST00000608440 TCRBV4S1A1TA0A5B7 111 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 NPIPB6E9PJ23 425 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 DIAPH2-AS1Q14236 149 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 C10orf128Q5T292 105 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 GUSBP11Q6P575 273 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 ZNF562Q6V9R5 426 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 VKORC1L1Q8N0U8 176 aa10.21□□□□□ -0.77
CTCFL-218ENST00000608440 GAGE12JA6NER3 117 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 PRRG2O14669 202 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 GAGE7O76087 117 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 GAGE12FP0CL80 117 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 GAGE12GP0CL81 117 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 GAGE12IP0CL82 117 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 LOXL1Q08397 574 aaPredicted RBP10.21□□□□□ -0.78
CTCFL-218ENST00000608440 GAGE4Q13068 117 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 SAP25Q8TEE9 199 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 NABP2Q9BQ15 211 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 CHAC1Q9BUX1 264 aa10.21□□□□□ -0.78
CTCFL-218ENST00000608440 IGKV3D-11A0A0A0MRZ8 115 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 CCL7P80098 99 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 PLP2Q04941 152 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 FAM231DQ6ZW35 169 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 PTH2Q96A98 100 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 AMMECR1Q9Y4X0 333 aaPredicted RBP10.2□□□□□ -0.78
CTCFL-218ENST00000608440 GNG3P63215 75 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 FAM27BQ5VT28 67 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 TNRC6BQ9UPQ9 1833 aaKnown RBP10.2□□□□□ -0.78
CTCFL-218ENST00000608440 PLXDC1Q8IUK5 500 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 ZNF441Q8N8Z8 693 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 FAM234AQ9H0X4 552 aa10.2□□□□□ -0.78
CTCFL-218ENST00000608440 IGKV2D-26A0A0A0MRZ7 120 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 PRSS46E5RG02 174 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 GNG5P63218 68 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 RAX2Q96IS3 184 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 FZR1Q9UM11 496 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 LY6G6EA0A0G2JKS1 128 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 LINC00473A8K010 186 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 DSCR4P56555 118 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-218ENST00000608440 SFTA2Q6UW10 78 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-218ENST00000608440 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-218ENST00000608440 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 U3KQA8 63 aa10.19□□□□□ -0.78
CTCFL-218ENST00000608440 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 MOB3BQ86TA1 216 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 C3orf56Q8N813 242 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 DKK2Q9UBU2 259 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 A0A087WX48 190 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 TRBV6-6A0A0A6YYG2 114 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 IGHV3-64DA0A0J9YX35 117 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 LINC01548A6NM66 108 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 NPIPB11E5RHQ5 1161 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 GFRA3O60609 400 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 RBP4P02753 201 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 FCER1GP30273 86 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 UBE2L3P68036 154 aaKnown RBP10.18□□□□□ -0.78
CTCFL-218ENST00000608440 OR1C1Q15619 314 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 PEAR1Q5VY43 1037 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-218ENST00000608440 SLC25A10Q9UBX3 287 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-218ENST00000608440 TCF19Q9Y242 345 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 CELSR3Q9NYQ7 3312 aa10.18□□□□□ -0.78
CTCFL-218ENST00000608440 TRAV3A0A0B4J244 114 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 IFI27P40305 119 aaPredicted RBP10.17□□□□□ -0.78
CTCFL-218ENST00000608440 SUMO3P55854 103 aaPredicted RBP10.17□□□□□ -0.78
CTCFL-218ENST00000608440 CEND1Q8N111 149 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 ZNF414Q96IQ9 312 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 FRYQ5TBA9 3013 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 CT45A10P0DMU9 189 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
CTCFL-218ENST00000608440 PRR20EP86478 221 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 PRR20CP86479 221 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 PRR20DP86480 221 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 PRR20BP86481 221 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 PRR20AP86496 221 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 LGALS9BQ3B8N2 356 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 MORN5Q5VZ52 161 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 LGALS9CQ6DKI2 356 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 RAB1BQ9H0U4 201 aa10.17□□□□□ -0.78
CTCFL-218ENST00000608440 NBEAQ8NFP9 2946 aa10.16□□□□□ -0.78
CTCFL-218ENST00000608440 A0A096LNJ9 63 aa10.16□□□□□ -0.78
CTCFL-218ENST00000608440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.16□□□□□ -0.78
CTCFL-218ENST00000608440 A0A1W2PQM1 296 aa10.16□□□□□ -0.78
CTCFL-218ENST00000608440 PEX7O00628 323 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms