RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 BPIFB3P59826 476 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 KCNIP4Q6PIL6 250 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 OR8I2Q8N0Y5 310 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 SOX21Q9Y651 276 aaPredicted RBP12.61□□□□□ -0.39
CTSA-214ENST00000606788 FNDC10F2Z333 226 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 CX3CL1P78423 397 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 OR1P1Q8NH06 330 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 LINC00527Q9UJ94 153 aa12.61□□□□□ -0.39
CTSA-214ENST00000606788 HOXB4P17483 251 aaPredicted RBP12.6□□□□□ -0.39
CTSA-214ENST00000606788 RBM14Q96PK6 669 aaKnown RBP12.6□□□□□ -0.39
CTSA-214ENST00000606788 NAV2Q8IVL1 2488 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 PGPA6NDG6 321 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 ISLRO14498 428 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
CTSA-214ENST00000606788 BRD3OSQ6XYD6 125 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 CEACAM3P40198 252 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
CTSA-214ENST00000606788 RAB4BP61018 213 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 TMEM249Q2WGJ8 235 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 TMEM219Q86XT9 240 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 FAM168AQ92567 244 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
CTSA-214ENST00000606788 GAR1Q9NY12 217 aaKnown RBP12.6□□□□□ -0.39
CTSA-214ENST00000606788 TRAV8-1A0A0A6YYK1 113 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 HYPMO75409 117 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 KIAA1644Q3SXP7 199 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 PYY3Q5JQD4 70 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 MRPL54Q6P161 138 aaKnown RBP12.59□□□□□ -0.39
CTSA-214ENST00000606788 OR11H6Q8NGC7 330 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 OR1L4Q8NGR5 311 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 C17orf77Q96MU5 243 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 OR2J3O76001 311 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 TMEM11P17152 192 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 IER3P46695 156 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 EFNA4P52798 201 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 ECSCRQ19T08 205 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 HIST3H2BBQ8N257 126 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 FXYD5Q96DB9 178 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 PFDN5Q99471 154 aa12.59□□□□□ -0.39
CTSA-214ENST00000606788 SONP18583 2426 aaKnown RBP12.59□□□□□ -0.39
CTSA-214ENST00000606788 A6NNC1 897 aa12.58□□□□□ -0.39
CTSA-214ENST00000606788 IGHV4-39P01824 125 aa12.58□□□□□ -0.39
CTSA-214ENST00000606788 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.39
CTSA-214ENST00000606788 EXOC3-AS1Q8N2X6 119 aa12.58□□□□□ -0.39
CTSA-214ENST00000606788 A1L4Q6 167 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 PHOX2AO14813 284 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 SAA4P35542 130 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 IGLC1P0CG04 106 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 SFTPCP11686 197 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 ATP5IP56385 69 aaPredicted RBP12.58□□□□□ -0.4
CTSA-214ENST00000606788 SSTP61278 116 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 ETFRF1Q6IPR1 90 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 THAP8Q8NA92 274 aa12.58□□□□□ -0.4
CTSA-214ENST00000606788 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 K7EIM0 57 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 GGCTO75223 188 aaKnown RBP12.57□□□□□ -0.4
CTSA-214ENST00000606788 I3L2K1 104 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 IGKV1-17P01599 117 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 IL4P05112 153 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 NBEAP1P0C6P0 100 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 MRPL41Q8IXM3 137 aaKnown RBP12.57□□□□□ -0.4
CTSA-214ENST00000606788 PERPQ96FX8 193 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 TMUB1Q9BVT8 246 aa12.57□□□□□ -0.4
CTSA-214ENST00000606788 IGHV3OR16-13A0A075B7E8 117 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 ODF3BA8MYP8 253 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 CRYGCP07315 174 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 CD33P20138 364 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 SELENOTP62341 195 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 Q56UQ5 140 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 BAGE2Q86Y30 109 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 TMEM116Q8NCL8 245 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 TBX15Q96SF7 602 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
CTSA-214ENST00000606788 OR2T8A6NH00 312 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 M0R1W7 72 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 CORTO00230 105 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 FSTL3O95633 263 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 SRP14P37108 136 aaKnown RBP12.56□□□□□ -0.4
CTSA-214ENST00000606788 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 MS4A10Q96PG2 267 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 PYGO2Q9BRQ0 406 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 CREBBPQ92793 2442 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 FBN2P35556 2912 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 ZNF705GA8MUZ8 300 aaPredicted RBP12.56□□□□□ -0.4
CTSA-214ENST00000606788 S100A8P05109 93 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 LMO4P61968 165 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 ARPC1AQ92747 370 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 HIGD1AQ9Y241 93 aa12.56□□□□□ -0.4
CTSA-214ENST00000606788 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
CTSA-214ENST00000606788 PEX7O00628 323 aa12.55□□□□□ -0.4
CTSA-214ENST00000606788 GNG7O60262 68 aa12.55□□□□□ -0.4
CTSA-214ENST00000606788 FCGR2BP31994 310 aaPredicted RBP12.55□□□□□ -0.4
CTSA-214ENST00000606788 ADMP35318 185 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms