RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 BORCS7Q96B45 105 aa0.15□□□□□ -2.39
SNORA28-201ENST00000606769 C2orf50Q96LR7 162 aa0.15□□□□□ -2.39
SNORA28-201ENST00000606769 TLNRD1Q9H1K6 362 aa0.15□□□□□ -2.39
SNORA28-201ENST00000606769 BCL2L10Q9HD36 194 aa0.15□□□□□ -2.39
SNORA28-201ENST00000606769 CDC42SE1Q9NRR8 79 aa0.15□□□□□ -2.39
SNORA28-201ENST00000606769 UTP11Q9Y3A2 253 aaKnown RBP0.15□□□□□ -2.39
SNORA28-201ENST00000606769 PHRF1Q9P1Y6 1649 aaKnown RBP0.15□□□□□ -2.39
SNORA28-201ENST00000606769 DENND4CQ5VZ89 1909 aa0.15□□□□□ -2.39
SNORA28-201ENST00000606769 PLXNA4Q9HCM2 1894 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 SCN10AQ9Y5Y9 1956 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 PEAK1Q9H792 1746 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 CCDC160A6NGH7 325 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 FAM159BA6NKW6 160 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 CLDN25C9JDP6 229 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 CCL16O15467 120 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 PDE6DO43924 150 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 RPP14O95059 124 aaKnown RBP0.14□□□□□ -2.39
SNORA28-201ENST00000606769 GADD45GO95257 159 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 C8GP07360 202 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 KRTAP2-3P0C7H8 128 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 PPIBP23284 216 aaKnown RBP0.14□□□□□ -2.39
SNORA28-201ENST00000606769 CASP1P29466 404 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 OMPP47874 163 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 EFNA4P52798 201 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 YPEL3P61236 119 aaPredicted RBP0.14□□□□□ -2.39
SNORA28-201ENST00000606769 HIST1H3AP68431 136 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 H3F3AP84243 136 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 MPV17LQ2QL34 196 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 TEX261Q6UWH6 196 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 TRAPPC6BQ86SZ2 158 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 OR6V1Q8N148 313 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 SLAMF6Q96DU3 332 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 AMELYQ99218 206 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 HIST1H2BLQ99880 126 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 MRPL57Q9BQC6 102 aaKnown RBP0.14□□□□□ -2.39
SNORA28-201ENST00000606769 PRADC1Q9BSG0 188 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 KRTAP2-4Q9BYR9 128 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 KRTAP2-1Q9BYU5 128 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 ACER3Q9NUN7 267 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 GLTPQ9NZD2 209 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 SLC22A13Q9Y226 551 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 U3KQ87 197 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 SCN3AQ9NY46 2000 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 EML5Q05BV3 1969 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 KIAA1549Q9HCM3 1950 aa0.14□□□□□ -2.39
SNORA28-201ENST00000606769 NCOA1Q15788 1441 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 TRBV6-4A0A1B0GX49 114 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 C7orf71A4D174 169 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 TMEM114B3SHH9 223 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 M0R378 163 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 CYB5BO43169 146 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 KLF7O75840 302 aaPredicted RBP0.13□□□□□ -2.39
SNORA28-201ENST00000606769 IGLV1-51P01701 117 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 S100A4P26447 101 aaKnown RBP0.13□□□□□ -2.39
SNORA28-201ENST00000606769 ATP5G3P48201 142 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 S100A7AQ86SG5 101 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 PDZD9Q8IXQ8 264 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 KRT222Q8N1A0 295 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 EXOC3-AS1Q8N2X6 119 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 LINC00301Q8NCQ3 95 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 OR11H6Q8NGC7 330 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 Q8TAT8 98 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 CMSS1Q9BQ75 279 aaKnown RBP0.13□□□□□ -2.39
SNORA28-201ENST00000606769 TMEM70Q9BUB7 260 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 CCDC90BQ9GZT6 254 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 PARVBQ9HBI1 364 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 TVP23BQ9NYZ1 205 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 FBXO5Q9UKT4 447 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 SLC35A3Q9Y2D2 325 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 CASP8AP2Q9UKL3 1982 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 MYH7BA7E2Y1 1941 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 TAF1LQ8IZX4 1826 aa0.13□□□□□ -2.39
SNORA28-201ENST00000606769 RFX7Q2KHR2 1363 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 OR7C1O76099 320 aaPredicted RBP0.12□□□□□ -2.39
SNORA28-201ENST00000606769 DHFRP00374 187 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 C1QBP02746 253 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 PRH1P02810 166 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 CST2P09228 141 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 PIGPP57054 158 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 RRN3P1Q2M238 152 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 PATE2Q6UY27 113 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 ZNF833PQ6ZTB9 187 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 GRINAQ7Z429 371 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 SLC30A7Q8NEW0 376 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 OR2T10Q8NGZ9 312 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 LINC00052Q96N35 136 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 SIGMAR1Q99720 223 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 KIFC1Q9BW19 673 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 TRIM4Q9C037 500 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 C10orf95Q9H7T3 257 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 C14orf132Q9NPU4 83 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 NHP2Q9NX24 153 aaKnown RBP0.12□□□□□ -2.39
SNORA28-201ENST00000606769 RASL12Q9NYN1 266 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 TAS2R7Q9NYW3 318 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 ALPK3Q96L96 1907 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 ARHGEF11O15085 1522 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 OBSL1O75147 1896 aa0.12□□□□□ -2.39
SNORA28-201ENST00000606769 CECR2Q9BXF3 1484 aa0.11□□□□□ -2.39
SNORA28-201ENST00000606769 KIF1BO60333 1816 aa0.11□□□□□ -2.39
SNORA28-201ENST00000606769 RTL1A6NKG5 1358 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms