RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 AP4M1O00189 453 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 PAGE4O60829 102 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 HYPMO75409 117 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 YPEL3P61236 119 aaPredicted RBP16.86■□□□□ 0.29
USP6NL-204ENST00000606752 MEF2BQ02080 365 aaPredicted RBP16.86■□□□□ 0.29
USP6NL-204ENST00000606752 PQLC2Q6ZP29 291 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 SVBPQ8N300 66 aa16.86■□□□□ 0.29
USP6NL-204ENST00000606752 ZNF469Q96JG9 3925 aaPredicted RBP16.86■□□□□ 0.29
USP6NL-204ENST00000606752 ZFHX3Q15911 3703 aa16.85■□□□□ 0.29
USP6NL-204ENST00000606752 TOMM40O96008 361 aa16.85■□□□□ 0.29
USP6NL-204ENST00000606752 SOHLH1Q5JUK2 328 aa16.85■□□□□ 0.29
USP6NL-204ENST00000606752 FLNAP21333 2647 aaKnown RBP16.84■□□□□ 0.29
USP6NL-204ENST00000606752 HOXA3O43365 443 aaPredicted RBP16.84■□□□□ 0.29
USP6NL-204ENST00000606752 SCGB2A1O75556 95 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 IGHV3-23P01764 117 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 PPIFP30405 207 aaKnown RBP16.84■□□□□ 0.29
USP6NL-204ENST00000606752 GUCA2BQ16661 112 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 MORN5Q5VZ52 161 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 LINC00305Q7Z4B0 112 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 CYB561D1Q8N8Q1 229 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 OR51G1Q8NGK1 321 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 MS4A10Q96PG2 267 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 UHRF2Q96PU4 802 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 CD81P60033 236 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 IL17RELQ6ZVW7 336 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 ZNF502Q8TBZ5 544 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 FAM167A-AS1Q96KT0 104 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 NOL4LQ96MY1 436 aaPredicted RBP16.84■□□□□ 0.29
USP6NL-204ENST00000606752 ZNF580Q9UK33 172 aa16.84■□□□□ 0.29
USP6NL-204ENST00000606752 OR7C2O60412 319 aa16.83■□□□□ 0.28
USP6NL-204ENST00000606752 NDUFS6O75380 124 aaKnown RBP16.83■□□□□ 0.28
USP6NL-204ENST00000606752 BRI3O95415 125 aa16.83■□□□□ 0.28
USP6NL-204ENST00000606752 LYZP61626 148 aa16.83■□□□□ 0.28
USP6NL-204ENST00000606752 ZNF503Q96F45 646 aa16.83■□□□□ 0.28
USP6NL-204ENST00000606752 SLC25A2Q9BXI2 301 aa16.83■□□□□ 0.28
USP6NL-204ENST00000606752 TMEM167BQ9NRX6 74 aa16.83■□□□□ 0.28
USP6NL-204ENST00000606752 TLN2Q9Y4G6 2542 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 TRAV5A0A0B4J249 113 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 OR2T8A6NH00 312 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 CTSGP08311 255 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 SRP14P37108 136 aaKnown RBP16.82■□□□□ 0.28
USP6NL-204ENST00000606752 GAR1Q9NY12 217 aaKnown RBP16.82■□□□□ 0.28
USP6NL-204ENST00000606752 FAM223BA6NKX1 122 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 H3BUA1 57 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 CEBPGP53567 150 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 UBE2G2P60604 165 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 FAM223AQ8IWN6 122 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 OR5AU1Q8NGC0 362 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 Q8WTZ3 238 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 EEF1AKMT3Q96AZ1 226 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 YAE1D1Q9NRH1 226 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 MRPL27Q9P0M9 148 aaKnown RBP16.82■□□□□ 0.28
USP6NL-204ENST00000606752 HIGD1AQ9Y241 93 aa16.82■□□□□ 0.28
USP6NL-204ENST00000606752 TRBV7-1A0A0A6YYK4 115 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 C11orf94C9JXX5 98 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 ATP5G2Q06055 141 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 CST9LP1Q5W188 147 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 SIGLECL1Q8N7X8 197 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 ZNF491Q8N8L2 437 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 TXNDC17Q9BRA2 123 aa16.81■□□□□ 0.28
USP6NL-204ENST00000606752 WI2-2373I1.2A0A1W2PRP0 233 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 NUPL2O15504 423 aaKnown RBP16.8■□□□□ 0.28
USP6NL-204ENST00000606752 SCO1O75880 301 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 ATRAIDQ6UW56 229 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 OR4F5Q8NH21 305 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 SUN5Q8TC36 379 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 OR4F4Q96R69 305 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 TMEM250H0YL14 139 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 SNAPINO95295 136 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 OR2C1O95371 312 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 TRGV3P03979 118 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 CLEC3BP05452 202 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 STXBP6Q8NFX7 210 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 RNF125Q96EQ8 232 aa16.8■□□□□ 0.28
USP6NL-204ENST00000606752 IL4P05112 153 aa16.79■□□□□ 0.28
USP6NL-204ENST00000606752 FAM90A2PQ658T7 463 aa16.79■□□□□ 0.28
USP6NL-204ENST00000606752 ATP6V0BQ99437 205 aa16.79■□□□□ 0.28
USP6NL-204ENST00000606752 CHRDL1Q9BU40 450 aa16.79■□□□□ 0.28
USP6NL-204ENST00000606752 PRSS22Q9GZN4 317 aa16.79■□□□□ 0.28
USP6NL-204ENST00000606752 ARL2-SNX15V9GYD0 113 aa16.79■□□□□ 0.28
USP6NL-204ENST00000606752 AKAP9Q99996 3911 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 OR10J4P0C629 311 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 GPR183P32249 361 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 ADMP35318 185 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 CCDC140Q96MF4 163 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 PAXXQ9BUH6 204 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 SLC25A39Q9BZJ4 359 aaPredicted RBP16.78■□□□□ 0.28
USP6NL-204ENST00000606752 NKX6-2Q9C056 277 aaPredicted RBP16.78■□□□□ 0.28
USP6NL-204ENST00000606752 NPFFR1Q9GZQ6 430 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 OR51M1Q9H341 326 aa16.78■□□□□ 0.28
USP6NL-204ENST00000606752 YTHDF2Q9Y5A9 579 aaKnown RBP16.78■□□□□ 0.28
USP6NL-204ENST00000606752 MXRA5Q9NR99 2828 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 FAM74A7A6NL05 159 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 PDE6DO43924 150 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 IGLV1-40P01703 118 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 ATP5G3P48201 142 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 CFHR3Q02985 330 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 TMEM86BQ8N661 226 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 USMG5Q96IX5 58 aa16.77■□□□□ 0.28
USP6NL-204ENST00000606752 NOTCH2Q04721 2471 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms