RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PHLDA1Q8WV24 401 aaPredicted RBP3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 LRRC29Q8WV35 223 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 FGF13Q92913 245 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF501Q96CX3 271 aaPredicted RBP3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 SFXN3Q9BWM7 321 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 TAAR2Q9P1P5 351 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 CEBPZOSA8MTT3 80 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 H3BMG7 143 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 SLC25A5P05141 298 aaKnown RBP3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 FXYD6P3P58550 94 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 ECSCRQ19T08 205 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 XP32Q5T750 250 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 LYRM7Q5U5X0 104 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 Q6ZVQ6 151 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 SH2D6Q7Z4S9 175 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 PRELID3AQ96N28 172 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 OR2A5Q96R48 311 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 JPT2Q9H910 190 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 CKLFQ9UBR5 152 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 PRO0461Q9UI25 63 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 SELENOKQ9Y6D0 94 aa3.99□□□□□ -1.77
SPTBN1-206ENST00000602898 C2orf70A6NJV1 201 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 CBLN1P23435 193 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 INSL3P51460 131 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 NSUN5P1Q3KNT7 163 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF695Q8IW36 515 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 OR10J6PQ8NGY7 276 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TMEM255BQ8WV15 326 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 GTSF1Q8WW33 167 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 FAM3DQ96BQ1 224 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TMEM70Q9BUB7 260 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TMEM191AQ9H0A3 160 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ARL2-SNX15V9GYD0 113 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 NUP210Q8TEM1 1887 aaPredicted RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 A0A0D9SEW6 157 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 C5orf63A6NC05 138 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 MRPS12O15235 138 aaKnown RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 GYPBP06028 91 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 RBMXP38159 391 aaKnown RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 RPS24P62847 133 aaKnown RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 RPL18AQ02543 176 aaKnown RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 FAM201AQ5SY85 155 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TSPO2Q5TGU0 170 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TMEM136Q6ZRR5 245 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ATP5L2Q7Z4Y8 100 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 OR4X2Q8NGF9 303 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF721Q8TF20 911 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TP73-AS1Q9UF72 201 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ADAMTS20P59510 1910 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 LRRK1Q38SD2 2015 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 TRBV5-4A0A0C4DH59 114 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 J3QT63 122 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ATP5G1P05496 136 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 SMIM13P0DJ93 91 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 NANOS3P60323 173 aaKnown RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 PMVKQ15126 192 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 EBLN2Q6P2I7 272 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF627Q7L945 461 aa3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 SLC25A44Q96H78 314 aaPredicted RBP3.98□□□□□ -1.77
SPTBN1-206ENST00000602898 OBSL1O75147 1896 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 ANGPTL7O43827 346 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 SCTP09683 121 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 IGLC6P0CF74 106 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 INAFM2P0DMQ5 153 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 FOLR3P41439 243 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 DGAT2L6Q6ZPD8 337 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 TRAPPC6BQ86SZ2 158 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 LMX1AQ8TE12 382 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 RITA1Q96K30 269 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 BMFQ96LC9 184 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 FAM19A4Q96LR4 140 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 NAA60Q9H7X0 242 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 RNF7Q9UBF6 113 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 MED12LQ86YW9 2145 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 CPAMD8Q8IZJ3 1885 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 RIIAD1A6NNX1 92 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 GGTLC3B5MD39 225 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 PAX4O43316 350 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 SNCGO76070 127 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 RENP00797 406 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 ASIPP42127 132 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF141Q15928 474 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 NMSQ5H8A3 153 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 FAM57BQ71RH2 274 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 DCAF4L2Q8NA75 395 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 SMRP1Q8NCR6 262 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 OR52N5Q8NH56 324 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 ADAT3Q96EY9 351 aaPredicted RBP3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 ANAPC10Q9UM13 185 aa3.97□□□□□ -1.77
SPTBN1-206ENST00000602898 GTF3C1Q12789 2109 aa3.96□□□□□ -1.77
SPTBN1-206ENST00000602898 TRAV5A0A0B4J249 113 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 IGKV1D-13A0A0B4J2D9 117 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 E9PLD3 99 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 C11orf98E9PRG8 122 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 ZFAND5O76080 213 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 IGKV1-13P0DP09 117 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 DAZ2Q13117 558 aaKnown RBP3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 HES1Q14469 280 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms