RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 SPART-AS1P0CW21 52 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 SAA1P0DJI8 122 aaPredicted RBP2.81□□□□□ -1.96
VRK3-222ENST00000601324 RAB3AP20336 220 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 MAS1LP35410 378 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 ASIPP42127 132 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 CDK10Q15131 360 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 C2orf83Q53S99 150 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 LELP1Q5T871 98 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 TPRA1Q86W33 373 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 PUSL1Q8N0Z8 303 aaKnown RBP2.81□□□□□ -1.96
VRK3-222ENST00000601324 MTURNQ8N3F0 131 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 DHRSXQ8N5I4 330 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.81□□□□□ -1.96
VRK3-222ENST00000601324 NEK7Q8TDX7 302 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 PHB2Q99623 299 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 PDCD1LG2Q9BQ51 273 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 NIPSNAP3BQ9BS92 247 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 UPK3BQ9BT76 320 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 VSIRQ9H7M9 311 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 REEP1Q9H902 201 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 SDHAF2Q9NX18 166 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 KCNIP1Q9NZI2 227 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 GNG8Q9UK08 70 aa2.81□□□□□ -1.96
VRK3-222ENST00000601324 LPAP08519 4548 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 IGHV3OR16-8A0A075B7F1 116 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 A0A087WTM6 91 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 IGLC7A0M8Q6 106 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 KNCNA6PVL3 124 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 M0R1X1 148 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 ZNF207O43670 478 aaKnown RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 CCDC22O60826 627 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 CTSGP08311 255 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 OCM2P0CE71 109 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 OCMP0CE72 109 aaPredicted RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 PRB4P10163 310 aaPredicted RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 ANXA8P13928 327 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 HIST1H1BP16401 226 aaKnown RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 ZNF93P35789 620 aaPredicted RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 TFPI2P48307 235 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 DAPP51397 102 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 LINC00315P59091 139 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 USF2Q15853 346 aaPredicted RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 VMA21Q3ZAQ7 101 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 FAM222AQ5U5X8 452 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 PLET1Q6UQ28 207 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 STXBP6Q8NFX7 210 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 TCTEX1D2Q8WW35 142 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 DGCR14Q96DF8 476 aaKnown RBP2.8□□□□□ -1.96
VRK3-222ENST00000601324 OR2A7Q96R45 310 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 GPER1Q99527 375 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 FAM192AQ9GZU8 254 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 BANF2Q9H503 90 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 TMEM138Q9NPI0 162 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 NUDT15Q9NV35 164 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 FSIP2Q5CZC0 6907 aa2.8□□□□□ -1.96
VRK3-222ENST00000601324 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 SMIM9A6NGZ8 99 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 TMEM212A6NML5 194 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 K7EIM0 57 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 REG1AP05451 166 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 HTR1AP08908 422 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 MGMTP16455 207 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 CEACAM6P40199 344 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 HNRNPA3P51991 378 aaKnown RBP2.79□□□□□ -1.96
VRK3-222ENST00000601324 TMED1Q13445 227 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 EIF4EBP1Q13541 118 aaPredicted RBP2.79□□□□□ -1.96
VRK3-222ENST00000601324 GPR176Q14439 515 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 TTC32Q5I0X7 151 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 SSX7Q7RTT5 188 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 TMEM252Q8N6L7 170 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 CCDC71LQ8N9Z2 235 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 TMEM167AQ8TBQ9 72 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 DCANP1Q8TF63 244 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 C7orf33Q8WU49 177 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 ACOT12Q8WYK0 555 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 CPNE2Q96FN4 548 aaPredicted RBP2.79□□□□□ -1.96
VRK3-222ENST00000601324 FAAP24Q9BTP7 215 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 MAGT1Q9H0U3 335 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 FGFR1OP2Q9NVK5 253 aa2.79□□□□□ -1.96
VRK3-222ENST00000601324 SMPD3Q9NY59 655 aaPredicted RBP2.79□□□□□ -1.96
VRK3-222ENST00000601324 V9GYY5 206 aaPredicted RBP2.79□□□□□ -1.96
VRK3-222ENST00000601324 IGKV3-7A0A075B6H7 116 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 TRAV8-7A0A075B6U6 113 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 IGHV3-49A0A0A0MS15 119 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 PLAC8L1A1L4L8 177 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 OR2T8A6NH00 312 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 H3BMM0 161 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 NUPL2O15504 423 aaKnown RBP2.78□□□□□ -1.96
VRK3-222ENST00000601324 CRYZL1O95825 349 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 C1QBP02746 253 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 CD3GP09693 182 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 CD37P11049 281 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 HTR2CP28335 458 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 POLR2IP36954 125 aaKnown RBP2.78□□□□□ -1.96
VRK3-222ENST00000601324 LEPP41159 167 aa2.78□□□□□ -1.96
VRK3-222ENST00000601324 RPL27AP46776 148 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms