RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 HAGHQ16775 308 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 THAP8Q8NA92 274 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 OR51G1Q8NGK1 321 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 TRGV9Q99603 122 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 UBQLN2Q9UHD9 624 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 U3KQE9 123 aa12.57□□□□□ -0.4
TRIM28-215ENST00000601150 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
TRIM28-215ENST00000601150 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
TRIM28-215ENST00000601150 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
TRIM28-215ENST00000601150 TFPI2P48307 235 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 RPL11P62913 178 aaKnown RBP12.56□□□□□ -0.4
TRIM28-215ENST00000601150 ZNF90Q03938 601 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 OR8G2PQ6IF36 304 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 TMEM14EPQ6UXP3 125 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 ACOT7LQ6ZUV0 252 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 GBGT1Q8N5D6 347 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 MARVELD1Q9BSK0 173 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 RABAC1Q9UI14 185 aa12.56□□□□□ -0.4
TRIM28-215ENST00000601150 IGKV1OR2-108A0A075B7D4 117 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 L7N2F9 121 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 METTL15P1P0C7V9 234 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 CMC4P56277 68 aaPredicted RBP12.55□□□□□ -0.4
TRIM28-215ENST00000601150 VAMP2P63027 116 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 AKR1C1Q04828 323 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 ODF3L2Q3SX64 289 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 RNF125Q96EQ8 232 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 RCHY1Q96PM5 261 aa12.55□□□□□ -0.4
TRIM28-215ENST00000601150 LSM5Q9Y4Y9 91 aaKnown RBP12.55□□□□□ -0.4
TRIM28-215ENST00000601150 TRAV2A0A0B4J234 112 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 C7orf66A4D0T2 115 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 K7EPK0 472 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
TRIM28-215ENST00000601150 EIF2B2P49770 351 aaKnown RBP12.54□□□□□ -0.4
TRIM28-215ENST00000601150 OR2F1Q13607 317 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 PBDC1Q9BVG4 233 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 PFDN2Q9UHV9 154 aa12.54□□□□□ -0.4
TRIM28-215ENST00000601150 SMCO3A2RU48 225 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 HELTA6NFD8 242 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 CCNKO75909 580 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 CFDP00746 253 aaPredicted RBP12.53□□□□□ -0.4
TRIM28-215ENST00000601150 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
TRIM28-215ENST00000601150 LYZP61626 148 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 DLK1P80370 383 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 TMEM144Q7Z5S9 345 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
TRIM28-215ENST00000601150 LOC102724200A0A096LPH7 203 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-215ENST00000601150 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 GOSR2O14653 212 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 PVALBP20472 110 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-215ENST00000601150 S100A10P60903 97 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 RRAS2P62070 204 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-215ENST00000601150 IL15RAQ13261 267 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 STXBP6Q8NFX7 210 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 MAP6D1Q9H9H5 199 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 MGAT4CQ9UBM8 478 aa12.52□□□□□ -0.41
TRIM28-215ENST00000601150 BUB3O43684 328 aa12.51□□□□□ -0.41
TRIM28-215ENST00000601150 BCAP31P51572 246 aa12.51□□□□□ -0.41
TRIM28-215ENST00000601150 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
TRIM28-215ENST00000601150 RAB32Q13637 225 aa12.51□□□□□ -0.41
TRIM28-215ENST00000601150 BPIFCQ8NFQ6 507 aa12.51□□□□□ -0.41
TRIM28-215ENST00000601150 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
TRIM28-215ENST00000601150 K7EQG2 157 aa12.5□□□□□ -0.41
TRIM28-215ENST00000601150 CAV2P51636 162 aa12.5□□□□□ -0.41
TRIM28-215ENST00000601150 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
TRIM28-215ENST00000601150 GGACTQ9BVM4 153 aa12.5□□□□□ -0.41
TRIM28-215ENST00000601150 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
TRIM28-215ENST00000601150 TENM3Q9P273 2699 aa12.5□□□□□ -0.41
TRIM28-215ENST00000601150 DEDDO75618 318 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 SIX6O95475 246 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 SIGLEC15Q6ZMC9 328 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 CYP2G1PQ6ZSU1 146 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 PPP1R14BQ96C90 147 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 STAB2Q8WWQ8 2551 aa12.49□□□□□ -0.41
TRIM28-215ENST00000601150 FAM24AA6NFZ4 105 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 SSNA1O43805 119 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 PTTG1O95997 202 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 GATA2P23769 480 aaPredicted RBP12.48□□□□□ -0.41
TRIM28-215ENST00000601150 APOC4P55056 127 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 DEFB131AP59861 70 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 SELENOTP62341 195 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 C1orf194Q5T5A4 169 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 TEPPQ6URK8 271 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 TMEM182Q6ZP80 229 aaPredicted RBP12.48□□□□□ -0.41
TRIM28-215ENST00000601150 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
TRIM28-215ENST00000601150 NMES1Q9C002 83 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms