RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	ID3	Q02535	119 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	DEFB135	Q30KP9	77 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	LINC00299	Q6ZSB3	139 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	OR51G1	Q8NGK1	321 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	OR4D5	Q8NGN0	318 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	DCANP1	Q8TF63	244 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	C20orf85	Q9H1P6	137 aa		11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	PAIP2B	Q9ULR5	123 aa	Known RBP	11.41	□□□□□ -0.58
PLD3-223	ENST00000600948	TENM2	Q9NT68	2774 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	SPRY2	O43597	315 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	IFNA21	P01568	189 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	POLR2G	P62487	172 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	RPP30	P78346	268 aa	Known RBP	11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	ZNF90	Q03938	601 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	MITD1	Q8WV92	249 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	RNF125	Q96EQ8	232 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	CCDC32	Q9BV29	185 aa		11.4	□□□□□ -0.58
PLD3-223	ENST00000600948	IGKV1OR2-108	A0A075B7D4	117 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	HELT	A6NFD8	242 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948		A6NHS1	94 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948		H3BP45	60 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	BUB3	O43684	328 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	TCRB	P04435	133 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	NKX2-1	P43699	371 aa	Predicted RBP	11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	SPANXN5	Q5MJ07	72 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	LEMD1	Q68G75	181 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	THAP8	Q8NA92	274 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	RNF183	Q96D59	192 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	TRGV9	Q99603	122 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	CSTL1	Q9H114	145 aa		11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	STRAP	Q9Y3F4	350 aa	Known RBP	11.39	□□□□□ -0.59
PLD3-223	ENST00000600948	ZNF688	P0C7X2	276 aa		11.38	□□□□□ -0.59
PLD3-223	ENST00000600948	EIF2B2	P49770	351 aa	Known RBP	11.38	□□□□□ -0.59
PLD3-223	ENST00000600948	OR8G2P	Q6IF36	304 aa		11.38	□□□□□ -0.59
PLD3-223	ENST00000600948	PBDC1	Q9BVG4	233 aa		11.38	□□□□□ -0.59
PLD3-223	ENST00000600948	STARD9	Q9P2P6	4700 aa		11.38	□□□□□ -0.59
PLD3-223	ENST00000600948	FABP1	P07148	127 aa		11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	AP2S1	P53680	142 aa	Predicted RBP	11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	OR2F1	Q13607	317 aa		11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	IAH1	Q2TAA2	248 aa	Predicted RBP	11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	IL17D	Q8TAD2	202 aa		11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	NUDT15	Q9NV35	164 aa		11.37	□□□□□ -0.59
PLD3-223	ENST00000600948	TRAV6	A0A075B6T7	132 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948		A0A0J9YWU9	116 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	SSSCA1	O60232	199 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	NUP62	P37198	522 aa	Predicted RBP	11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	PAX9	P55771	341 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	LYZ	P61626	148 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	SIGLEC15	Q6ZMC9	328 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	ACOT7L	Q6ZUV0	252 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	S100Z	Q8WXG8	99 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	SMIM8	Q96KF7	97 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	PSENEN	Q9NZ42	101 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	TBC1D24	Q9ULP9	559 aa		11.36	□□□□□ -0.59
PLD3-223	ENST00000600948	PMS2P5	A8MQ11	134 aa		11.35	□□□□□ -0.59
PLD3-223	ENST00000600948	SNRPGP15	A8MWD9	76 aa		11.35	□□□□□ -0.59
PLD3-223	ENST00000600948	TRPT1	Q86TN4	253 aa	Known RBP	11.35	□□□□□ -0.59
PLD3-223	ENST00000600948	SEC22C	Q9BRL7	303 aa		11.35	□□□□□ -0.59
PLD3-223	ENST00000600948	NRN1	Q9NPD7	142 aa		11.35	□□□□□ -0.59
PLD3-223	ENST00000600948	RCL1	Q9Y2P8	373 aa	Known RBP	11.35	□□□□□ -0.59
PLD3-223	ENST00000600948	KNCN	A6PVL3	124 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	CCS	O14618	274 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	CCNK	O75909	580 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	SCGB1D2	O95969	90 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	TMEM14EP	Q6UXP3	125 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	STH	Q8IWL8	128 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	ZNF431	Q8TF32	576 aa	Predicted RBP	11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	GATAD1	Q8WUU5	269 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	SEPSECS	Q9HD40	501 aa	Known RBP	11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	PTTG2	Q9NZH5	202 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	GSKIP	Q9P0R6	139 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	PFDN2	Q9UHV9	154 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	RYR3	Q15413	4870 aa		11.34	□□□□□ -0.59
PLD3-223	ENST00000600948	FAM240B	A0A1B0GVZ2	78 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	CFD	P00746	253 aa	Predicted RBP	11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	CA1	P00915	261 aa	Predicted RBP	11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	MBP	P02686	304 aa	Predicted RBP	11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	H2AFB2	P0C5Z0	115 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	AKR1C1	Q04828	323 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	ASAH1	Q13510	395 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	PSMG4	Q5JS54	123 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	C1orf194	Q5T5A4	169 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	TMEM144	Q7Z5S9	345 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	RAB40C	Q96S21	281 aa		11.33	□□□□□ -0.6
PLD3-223	ENST00000600948	LCE6A	A0A183	80 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	TSC22D2	O75157	780 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	GIG44	P09565	113 aa	Predicted RBP	11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	METTL15P1	P0C7V9	234 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	GATA2	P23769	480 aa	Predicted RBP	11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	TAS2R30	P59541	319 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	DLK1	P80370	383 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	MZT2B	Q6NZ67	158 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	WDR12	Q9GZL7	423 aa	Known RBP	11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	FBXL17	Q9UF56	701 aa		11.32	□□□□□ -0.6
PLD3-223	ENST00000600948	SMCO3	A2RU48	225 aa		11.31	□□□□□ -0.6
PLD3-223	ENST00000600948	C7orf66	A4D0T2	115 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms