RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 S100A10P60903 97 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 POLR2GP62487 172 aaKnown RBP eCLIP7.26□□□□□ -1.25
HIF3A-219ENST00000600879 ID3Q02535 119 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 WT1-ASQ06250 92 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 MAPKAPK5-AS1Q8N8E1 139 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 ZNF502Q8TBZ5 544 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 TMEM190Q8WZ59 177 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 NMES1Q9C002 83 aa7.26□□□□□ -1.25
HIF3A-219ENST00000600879 RCL1Q9Y2P8 373 aaKnown RBP7.26□□□□□ -1.25
HIF3A-219ENST00000600879 IGHV3-49A0A0A0MS15 119 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 IGHV3-21A0A0B4J1V1 117 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 OR2T8A6NH00 312 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 K7EPK0 472 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 L7N2F9 121 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 TGOLN2O43493 480 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 SSSCA1O60232 199 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 CRYGCP07315 174 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 HIST1H1BP16401 226 aaKnown RBP7.25□□□□□ -1.25
HIF3A-219ENST00000600879 HLA-DMBP28068 263 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 SNCAP37840 140 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 ELLP55199 621 aaPredicted RBP7.25□□□□□ -1.25
HIF3A-219ENST00000600879 VAMP2P63027 116 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 IL15RAQ13261 267 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 RAB32Q13637 225 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 LRRC37A5PQ49AS3 106 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 Q6ZTC4 211 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 CXorf58Q96LI9 332 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 CIB3Q96Q77 187 aaPredicted RBP7.25□□□□□ -1.25
HIF3A-219ENST00000600879 CHRDL1Q9BU40 450 aa7.25□□□□□ -1.25
HIF3A-219ENST00000600879 ZNF436Q9C0F3 470 aaPredicted RBP7.25□□□□□ -1.25
HIF3A-219ENST00000600879 A0A1B0GVG6 124 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 C11orf94C9JXX5 98 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 INS-IGF2F8WCM5 200 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 CYB5BO43169 146 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 IFNA10P01566 189 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 RLN2P04090 185 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 GIPP09681 153 aaPredicted RBP7.24□□□□□ -1.25
HIF3A-219ENST00000600879 RNASE2P10153 161 aaKnown RBP7.24□□□□□ -1.25
HIF3A-219ENST00000600879 PVALBP20472 110 aaPredicted RBP7.24□□□□□ -1.25
HIF3A-219ENST00000600879 HTR2BP41595 481 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 SLC25A24Q6NUK1 477 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 ZNF767PQ75MW2 155 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 GBGT1Q8N5D6 347 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 SLC24A4Q8NFF2 622 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 PPP1R1CQ8WVI7 109 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 RAB40CQ96S21 281 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 DAZ1Q9NQZ3 744 aaKnown RBP7.24□□□□□ -1.25
HIF3A-219ENST00000600879 PSENENQ9NZ42 101 aa7.24□□□□□ -1.25
HIF3A-219ENST00000600879 PAIP2BQ9ULR5 123 aaKnown RBP7.24□□□□□ -1.25
HIF3A-219ENST00000600879 F11RQ9Y624 299 aaKnown RBP7.24□□□□□ -1.25
HIF3A-219ENST00000600879 IGLV2-18A0A075B6J9 118 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 IGHV3OR16-13A0A075B7E8 117 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 IGHV3-74A0A0B4J1X5 117 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 TRAV10A0A0B4J240 114 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 IGHV4-28A0A0C4DH34 117 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 H3BP45 60 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 RBMY1A1P0DJD3 496 aaKnown RBP7.23□□□□□ -1.25
HIF3A-219ENST00000600879 RBMY1CP0DJD4 496 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 NPY1RP25929 384 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 BCAP31P51572 246 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 SUB1P53999 127 aaKnown RBP eCLIP7.23□□□□□ -1.25
HIF3A-219ENST00000600879 RAP2BP61225 183 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 RPP30P78346 268 aaKnown RBP7.23□□□□□ -1.25
HIF3A-219ENST00000600879 RBMY1FQ15415 496 aaKnown RBP7.23□□□□□ -1.25
HIF3A-219ENST00000600879 SPANXN5Q5MJ07 72 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 NOXA1Q86UR1 476 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 ZNF114Q8NC26 417 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 OR1P1Q8NH06 330 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 CHAC2Q8WUX2 184 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 ASB13Q8WXK3 278 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 MISP3Q96FF7 219 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 SMIM8Q96KF7 97 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 RNF2Q99496 336 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 U3KQ87 197 aa7.23□□□□□ -1.25
HIF3A-219ENST00000600879 MPC2O95563 127 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 PET100P0DJ07 73 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 PAX9P55771 341 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 TAS2R30P59541 319 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 RAB11AP62491 216 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 BSXQ3C1V8 233 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 C2orf83Q53S99 150 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 LEMD1Q68G75 181 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 POM121L12Q8N7R1 296 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 Q8NAQ8 132 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 UBAC2Q8NBM4 344 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 OR5AC2Q9NZP5 309 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 THYN1Q9P016 225 aa7.22□□□□□ -1.25
HIF3A-219ENST00000600879 STRAPQ9Y3F4 350 aaKnown RBP7.22□□□□□ -1.25
HIF3A-219ENST00000600879 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 E5RGE8 158 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 H0YIZ8 118 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 CORTO00230 105 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 TSC22D2O75157 780 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 TMEM50AO95807 157 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 ADMP35318 185 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 CAV2P51636 162 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 ATP5IP56385 69 aaPredicted RBP7.21□□□□□ -1.26
HIF3A-219ENST00000600879 FGL1Q08830 312 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms