RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 LINC00299Q6ZSB3 139 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 LYG2Q86SG7 212 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 FAM24BQ8N5W8 94 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 OR51G1Q8NGK1 321 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 RNF183Q96D59 192 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 CSTL1Q9H114 145 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 LYSTQ99698 3801 aa12.41□□□□□ -0.42
NOTCH3-205ENST00000600841 SACSQ9NZJ4 4579 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 RYR2Q92736 4967 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 MPTX1A8MV57 137 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 K7EQG2 157 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 WRBO00258 174 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 IFNA21P01568 189 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 FABP1P07148 127 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 ANXA7P20073 488 aaKnown RBP12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 C16orf54Q6UWD8 224 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
NOTCH3-205ENST00000600841 ADAP1O75689 374 aa12.39□□□□□ -0.43
NOTCH3-205ENST00000600841 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
NOTCH3-205ENST00000600841 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
NOTCH3-205ENST00000600841 RNF125Q96EQ8 232 aa12.39□□□□□ -0.43
NOTCH3-205ENST00000600841 AGRNO00468 2067 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 ZNF90Q03938 601 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 ZNF846Q147U1 533 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 STHQ8IWL8 128 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 DCANP1Q8TF63 244 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 CCDC32Q9BV29 185 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 PFDN2Q9UHV9 154 aa12.38□□□□□ -0.43
NOTCH3-205ENST00000600841 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 LYRM1O43325 122 aa12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 BUB3O43684 328 aa12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 ID3Q02535 119 aa12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 OR8G2PQ6IF36 304 aa12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 WDR12Q9GZL7 423 aaKnown RBP12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 STRAPQ9Y3F4 350 aaKnown RBP12.37□□□□□ -0.43
NOTCH3-205ENST00000600841 SNRPGP15A8MWD9 76 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 H3BP45 60 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 PLA2G10O15496 165 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 NKX2-1P43699 371 aaPredicted RBP12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 SIGLEC15Q6ZMC9 328 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 THAP8Q8NA92 274 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 GATAD1Q8WUU5 269 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 TRGV9Q99603 122 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
NOTCH3-205ENST00000600841 LCE6AA0A183 80 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 PRSS46E5RG02 174 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 CA1P00915 261 aaPredicted RBP12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 LYZP61626 148 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 OR2F1Q13607 317 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 MITD1Q8WV92 249 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 NRN1Q9NPD7 142 aa12.35□□□□□ -0.43
NOTCH3-205ENST00000600841 IGKV1OR2-108A0A075B7D4 117 aa12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 SSSCA1O60232 199 aa12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 SNRPD3P62318 126 aaKnown RBP12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 PSMG4Q5JS54 123 aa12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 TMEM217Q8N7C4 229 aa12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
NOTCH3-205ENST00000600841 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 CFDP00746 253 aaPredicted RBP12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 TCRBP04435 133 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 AKR1C1Q04828 323 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 ACTL10Q5JWF8 245 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 ACOT7LQ6ZUV0 252 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 TRPT1Q86TN4 253 aaKnown RBP12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 PPP1R14BQ96C90 147 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 RARRES2Q99969 163 aa12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.44
NOTCH3-205ENST00000600841 TRAV6A0A075B6T7 132 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 CXorf65A6NEN9 183 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 SCGB1D2O95969 90 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 ZBTB8BQ8NAP8 495 aaPredicted RBP12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 NUDT15Q9NV35 164 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 GSKIPQ9P0R6 139 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 PLECQ15149 4684 aaKnown RBP12.32□□□□□ -0.44
NOTCH3-205ENST00000600841 SPP1P10451 314 aa12.31□□□□□ -0.44
NOTCH3-205ENST00000600841 PMS2P11Q13670 270 aa12.31□□□□□ -0.44
NOTCH3-205ENST00000600841 TMEM41BQ5BJD5 291 aa12.31□□□□□ -0.44
NOTCH3-205ENST00000600841 MZT2BQ6NZ67 158 aa12.31□□□□□ -0.44
NOTCH3-205ENST00000600841 RAB40CQ96S21 281 aa12.31□□□□□ -0.44
NOTCH3-205ENST00000600841 SMCO3A2RU48 225 aa12.3□□□□□ -0.44
NOTCH3-205ENST00000600841 UPK1BO75841 260 aa12.3□□□□□ -0.44
NOTCH3-205ENST00000600841 JTBO76095 146 aa12.3□□□□□ -0.44
NOTCH3-205ENST00000600841 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
NOTCH3-205ENST00000600841 OR8I2Q8N0Y5 310 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms