RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 IFNA21P01568 189 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
SSBP4-208ENST00000600628 IFNA4P05014 189 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 H2AFB2P0C5Z0 115 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 RD3LP0DJH9 198 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 RAB11AP62491 216 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 ZNF90Q03938 601 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 IAH1Q2TAA2 248 aaPredicted RBP6.49□□□□□ -1.37
SSBP4-208ENST00000600628 OR8G2PQ6IF36 304 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 TCF24Q7RTU0 167 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 WFDC3Q8IUB2 231 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 KIR2DL5AQ8N109 375 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 OR51G1Q8NGK1 321 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 KIR2DL5BQ8NHK3 375 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 Q8WTZ3 238 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 ACY3Q96HD9 319 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 GRAMD2BQ96HH9 432 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 C17orf77Q96MU5 243 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 METTL26Q96S19 204 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 RAB40CQ96S21 281 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 SEC22CQ9BRL7 303 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 MARVELD1Q9BSK0 173 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 MS4A6AQ9H2W1 248 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 A0A1W2PS18 150 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 TSC22D2O75157 780 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 SCGB2A1O75556 95 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 IL4P05112 153 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 HNRNPCP07910 306 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSBP4-208ENST00000600628 BMI1P35226 326 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 P2RY1P47900 373 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 RPP30P78346 268 aaKnown RBP6.48□□□□□ -1.37
SSBP4-208ENST00000600628 CASC10Q5T4H9 136 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 TMEM182Q6ZP80 229 aaPredicted RBP6.48□□□□□ -1.37
SSBP4-208ENST00000600628 Q6ZWC4 215 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 TMEM144Q7Z5S9 345 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 NRARPQ7Z6K4 114 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 C12orf45Q8N5I9 185 aaPredicted RBP6.48□□□□□ -1.37
SSBP4-208ENST00000600628 FAM24BQ8N5W8 94 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 RNF125Q96EQ8 232 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 GGTLC1Q9BX51 225 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 TMEM231Q9H6L2 316 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 MAP6D1Q9H9H5 199 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
SSBP4-208ENST00000600628 SLC45A2Q9UMX9 530 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 TP53TG1Q9Y2A0 90 aa6.48□□□□□ -1.37
SSBP4-208ENST00000600628 STRAPQ9Y3F4 350 aaKnown RBP6.48□□□□□ -1.37
SSBP4-208ENST00000600628 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 ALMS1Q8TCU4 4167 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 LOC102724200A0A096LPH7 203 aaPredicted RBP6.47□□□□□ -1.37
SSBP4-208ENST00000600628 SNRPGP15A8MWD9 76 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 PFDN1O60925 122 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 CCNKO75909 580 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
SSBP4-208ENST00000600628 PLP1P60201 277 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 DLK1P80370 383 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 ARL16Q0P5N6 197 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 SPANXN5Q5MJ07 72 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 C1orf194Q5T5A4 169 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 ACOT7LQ6ZUV0 252 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 OVOL2Q9BRP0 275 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 RETNQ9HD89 108 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 RYR2Q92736 4967 aa6.47□□□□□ -1.37
SSBP4-208ENST00000600628 IGHV3-66A0A0C4DH42 116 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 H3BP45 60 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 UBE2CO00762 179 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 SOCS3O14543 225 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 CCSO14618 274 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 SSSCA1O60232 199 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 CFDP00746 253 aaPredicted RBP6.46□□□□□ -1.38
SSBP4-208ENST00000600628 GIG44P09565 113 aaPredicted RBP6.46□□□□□ -1.38
SSBP4-208ENST00000600628 LYL1P12980 280 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 EIF2B2P49770 351 aaKnown RBP6.46□□□□□ -1.38
SSBP4-208ENST00000600628 ZNF124Q15973 351 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 SLC35E1Q96K37 410 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 C2orf50Q96LR7 162 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 GGACTQ9BVM4 153 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 PSENENQ9NZ42 101 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 UBQLN2Q9UHD9 624 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 RABAC1Q9UI14 185 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 KMT2AQ03164 3969 aa6.46□□□□□ -1.38
SSBP4-208ENST00000600628 HELTA6NFD8 242 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 ZFP92A6NM28 416 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 PRAF2O60831 178 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 DEDDO75618 318 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 AP2S1P53680 142 aaPredicted RBP6.45□□□□□ -1.38
SSBP4-208ENST00000600628 PAFAH1B2P68402 229 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 RGS21Q2M5E4 152 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 VWC2Q2TAL6 325 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 Q6ZNX1 250 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 APRG1Q8IVJ8 170 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 GBGT1Q8N5D6 347 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 CHAC2Q8WUX2 184 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 RNF183Q96D59 192 aa6.45□□□□□ -1.38
SSBP4-208ENST00000600628 HYDINQ4G0P3 5121 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 IGKV3-7A0A075B6H7 116 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 A0A1B0GVG6 124 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 FABP1P07148 127 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 METTL15P1P0C7V9 234 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms