RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 BSXQ3C1V8 233 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 ZNF114Q8NC26 417 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 OR1S1Q8NH92 325 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 PDCD10Q9BUL8 212 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 HINT2Q9BX68 163 aa12.67□□□□□ -0.38
SSBP4-207ENST00000600244 ZNF436Q9C0F3 470 aaPredicted RBP12.67□□□□□ -0.38
SSBP4-207ENST00000600244 IGLV11-55A0A075B6I3 123 aa12.66□□□□□ -0.38
SSBP4-207ENST00000600244 IGHV3-35A0A0C4DH35 117 aa12.66□□□□□ -0.38
SSBP4-207ENST00000600244 REG1AP05451 166 aa12.66□□□□□ -0.38
SSBP4-207ENST00000600244 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
SSBP4-207ENST00000600244 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
SSBP4-207ENST00000600244 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
SSBP4-207ENST00000600244 ZBTB8BQ8NAP8 495 aaPredicted RBP12.66□□□□□ -0.38
SSBP4-207ENST00000600244 FLG2Q5D862 2391 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-207ENST00000600244 TRBV7-1A0A0A6YYK4 115 aa12.65□□□□□ -0.38
SSBP4-207ENST00000600244 MIFP14174 115 aa12.65□□□□□ -0.38
SSBP4-207ENST00000600244 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
SSBP4-207ENST00000600244 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
SSBP4-207ENST00000600244 RBKSQ9H477 322 aa12.65□□□□□ -0.38
SSBP4-207ENST00000600244 F11RQ9Y624 299 aaKnown RBP12.65□□□□□ -0.38
SSBP4-207ENST00000600244 AGRNO00468 2067 aa12.65□□□□□ -0.39
SSBP4-207ENST00000600244 MFSD2BA6NFX1 497 aa12.64□□□□□ -0.39
SSBP4-207ENST00000600244 NXPH3O95157 252 aa12.64□□□□□ -0.39
SSBP4-207ENST00000600244 ERHP84090 104 aaKnown RBP12.64□□□□□ -0.39
SSBP4-207ENST00000600244 GSG1LQ6UXU4 331 aa12.64□□□□□ -0.39
SSBP4-207ENST00000600244 UBE2DNLQ8IWF7 75 aa12.64□□□□□ -0.39
SSBP4-207ENST00000600244 OR1P1Q8NH06 330 aa12.64□□□□□ -0.39
SSBP4-207ENST00000600244 GIG44P09565 113 aaPredicted RBP12.63□□□□□ -0.39
SSBP4-207ENST00000600244 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
SSBP4-207ENST00000600244 HIST1H1BP16401 226 aaKnown RBP12.63□□□□□ -0.39
SSBP4-207ENST00000600244 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
SSBP4-207ENST00000600244 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
SSBP4-207ENST00000600244 H2BFSP57053 126 aa12.63□□□□□ -0.39
SSBP4-207ENST00000600244 RNF212Q495C1 297 aa12.63□□□□□ -0.39
SSBP4-207ENST00000600244 DAZ1Q9NQZ3 744 aaKnown RBP12.63□□□□□ -0.39
SSBP4-207ENST00000600244 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
SSBP4-207ENST00000600244 X6R8D5 127 aa12.63□□□□□ -0.39
SSBP4-207ENST00000600244 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
SSBP4-207ENST00000600244 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 CEBPZOSA8MTT3 80 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
SSBP4-207ENST00000600244 GOSR2O14653 212 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 SYNGR2O43760 224 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 SSNA1O43805 119 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 MED6O75586 246 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 GPR183P32249 361 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 ZNF767PQ75MW2 155 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 DTD1Q8TEA8 209 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 TMEM170AQ8WVE7 144 aa12.62□□□□□ -0.39
SSBP4-207ENST00000600244 FAM25EA8MYX2 175 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 SIX6O95475 246 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 MBPP02686 304 aaPredicted RBP12.61□□□□□ -0.39
SSBP4-207ENST00000600244 HTR2BP41595 481 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP4-207ENST00000600244 ZNF502Q8TBZ5 544 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 CXorf58Q96LI9 332 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 NMES1Q9C002 83 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 MAGT1Q9H0U3 335 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 C11orf1Q9H5F2 150 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 ENY2Q9NPA8 101 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 HEYLQ9NQ87 328 aaPredicted RBP12.61□□□□□ -0.39
SSBP4-207ENST00000600244 GSKIPQ9P0R6 139 aa12.61□□□□□ -0.39
SSBP4-207ENST00000600244 RCL1Q9Y2P8 373 aaKnown RBP12.61□□□□□ -0.39
SSBP4-207ENST00000600244 TMEM50AO95807 157 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 DEFA4P12838 97 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 CXCL3P19876 107 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 SNCAP37840 140 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 PAX9P55771 341 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 ATP5IP56385 69 aaPredicted RBP12.6□□□□□ -0.39
SSBP4-207ENST00000600244 RRAS2P62070 204 aaPredicted RBP12.6□□□□□ -0.39
SSBP4-207ENST00000600244 FCN2Q15485 313 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 Q6ZNX1 250 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 OR11H7Q8NGC8 314 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 MGAT4CQ9UBM8 478 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 U3KQ87 197 aa12.6□□□□□ -0.39
SSBP4-207ENST00000600244 I3L2K1 104 aa12.59□□□□□ -0.39
SSBP4-207ENST00000600244 K7EIM0 57 aa12.59□□□□□ -0.39
SSBP4-207ENST00000600244 K7EPK0 472 aa12.59□□□□□ -0.39
SSBP4-207ENST00000600244 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■□□□□ 8.5
SSBP4-207ENST00000600244 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
SSBP4-207ENST00000600244 SMIM8Q96KF7 97 aa12.59□□□□□ -0.39
SSBP4-207ENST00000600244 CIB3Q96Q77 187 aaPredicted RBP12.59□□□□□ -0.39
SSBP4-207ENST00000600244 MED28Q9H204 178 aa12.59□□□□□ -0.39
SSBP4-207ENST00000600244 C15orf62A8K5M9 175 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 K7EMT4 169 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 WRBO00258 174 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 CYB5BO43169 146 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 CYCSP99999 105 aaKnown RBP12.58□□□□□ -0.4
SSBP4-207ENST00000600244 VN1R17PQ8TDU5 208 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 RAB40CQ96S21 281 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 RNF2Q99496 336 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 THYN1Q9P016 225 aa12.58□□□□□ -0.4
SSBP4-207ENST00000600244 CORTO00230 105 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 TGOLN2O43493 480 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms