RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 PLP1P60201 277 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 TMEM183AQ8IXX5 376 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 SIRPDQ9H106 197 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 COL12A1Q99715 3063 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 GCGP01275 180 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 CCDC144NLQ6NUI1 221 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 BPESC1Q9GZL8 116 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 CDC42EP3Q9UKI2 254 aa17.13■□□□□ 0.33
GRAMD1A-212ENST00000600231 KLF17Q5JT82 389 aaPredicted RBP17.12■□□□□ 0.33
GRAMD1A-212ENST00000600231 NHLRC2Q8NBF2 726 aa17.12■□□□□ 0.33
GRAMD1A-212ENST00000600231 MGST1P10620 155 aaKnown RBP17.12■□□□□ 0.33
GRAMD1A-212ENST00000600231 MYCNOSP40205 109 aa17.12■□□□□ 0.33
GRAMD1A-212ENST00000600231 LYZP61626 148 aa17.12■□□□□ 0.33
GRAMD1A-212ENST00000600231 HIST1H2BLQ99880 126 aa17.12■□□□□ 0.33
GRAMD1A-212ENST00000600231 NCBP2LA6PVI3 153 aaKnown RBP17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 IGKV1-17P01599 117 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 NBEAP1P0C6P0 100 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 COA6Q5JTJ3 125 aaKnown RBP17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 RASL11BQ9BPW5 248 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 TRAV34A0A0B4J273 112 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 PEX7O00628 323 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 TAS2R60P59551 318 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 CX3CL1P78423 397 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 MINOS1Q5TGZ0 78 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 MINOS1-NBL1R4GNA1 71 aa17.11■□□□□ 0.33
GRAMD1A-212ENST00000600231 CNN1P51911 297 aaKnown RBP17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 GNG5P63218 68 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 RPEL1Q2QD12 228 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 OSTCQ9NRP0 149 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 IGHV2-70DA0A0C4DH43 119 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 GP9P14770 177 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 LMO4P61968 165 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 HIGD1AQ9Y241 93 aa17.1■□□□□ 0.33
GRAMD1A-212ENST00000600231 ACACBO00763 2458 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 OOSP1A8MZH6 123 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 ISLRO14498 428 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 NDPQ00604 133 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 ZNF562Q6V9R5 426 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 Q8N6K4 173 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 GSN-AS1Q9NRJ2 163 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 CACNA1BQ00975 2339 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 H3BTX0 84 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 TOX4O94842 621 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 S100A12P80511 92 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 ASPHD1Q5U4P2 390 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 OR8I2Q8N0Y5 310 aa17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 RBM14Q96PK6 669 aaKnown RBP17.09■□□□□ 0.33
GRAMD1A-212ENST00000600231 TRAV9-1A0A075B6T8 112 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 PGPA6NDG6 321 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 FRMD6-AS1P0C7T7 363 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 RD3LP0DJH9 198 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 PDLIM4P50479 330 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 YPEL3P61236 119 aaPredicted RBP17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 IBA57Q5T440 356 aaKnown RBP17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 CDPF1Q6NVV7 123 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 PACRGQ96M98 296 aaPredicted RBP17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 S4R3C0 116 aa17.08■□□□□ 0.33
GRAMD1A-212ENST00000600231 CBLN1P23435 193 aa17.08■□□□□ 0.32
GRAMD1A-212ENST00000600231 EBI3Q14213 229 aa17.08■□□□□ 0.32
GRAMD1A-212ENST00000600231 TBX15Q96SF7 602 aa17.08■□□□□ 0.32
GRAMD1A-212ENST00000600231 EPDR1Q9UM22 224 aa17.08■□□□□ 0.32
GRAMD1A-212ENST00000600231 OVOL3O00110 214 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 SLC25A5P05141 298 aaKnown RBP17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 BAGE2Q86Y30 109 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 OR1L6Q8NGR2 347 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 ARPC1AQ92747 370 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 SLC25A39Q9BZJ4 359 aaPredicted RBP17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 IGSF10Q6WRI0 2623 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 FABP1P07148 127 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 HIST1H1BP16401 226 aaKnown RBP17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 ZNF600Q6ZNG1 722 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 FANCD2OSQ96PS1 177 aa17.07■□□□□ 0.32
GRAMD1A-212ENST00000600231 AMBPP02760 352 aa17.06■□□□□ 0.32
GRAMD1A-212ENST00000600231 SGK494Q96LW2 274 aa17.06■□□□□ 0.32
GRAMD1A-212ENST00000600231 TMEM11P17152 192 aa17.06■□□□□ 0.32
GRAMD1A-212ENST00000600231 ADMP35318 185 aa17.06■□□□□ 0.32
GRAMD1A-212ENST00000600231 MRPL27Q9P0M9 148 aaKnown RBP17.06■□□□□ 0.32
GRAMD1A-212ENST00000600231 SERTAD4Q9NUC0 356 aa17.05■□□□□ 0.32
GRAMD1A-212ENST00000600231 SPINK4O60575 86 aa17.05■□□□□ 0.32
GRAMD1A-212ENST00000600231 UBE2E1P51965 193 aa17.05■□□□□ 0.32
GRAMD1A-212ENST00000600231 AJUBAQ96IF1 538 aa17.05■□□□□ 0.32
GRAMD1A-212ENST00000600231 RPH3ALQ9UNE2 315 aa17.05■□□□□ 0.32
GRAMD1A-212ENST00000600231 SPG11Q96JI7 2443 aa17.05■□□□□ 0.32
GRAMD1A-212ENST00000600231 IGLV11-55A0A075B6I3 123 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 NPIPB5A8MRT5 1133 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 IER3P46695 156 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 TCL1AP56279 114 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 CA1P00915 261 aaPredicted RBP17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 IGHV4-39P01824 125 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 SLC35B1P78383 322 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 TMEM183BQ1AE95 376 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 FAM120AOSQ5T036 256 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 Q9H3A6 140 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 LPAR2Q9HBW0 351 aa17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 TBL2Q9Y4P3 447 aaKnown RBP17.04■□□□□ 0.32
GRAMD1A-212ENST00000600231 FLNCQ14315 2725 aa17.03■□□□□ 0.32
GRAMD1A-212ENST00000600231 ZNF705GA8MUZ8 300 aaPredicted RBP17.03■□□□□ 0.32
GRAMD1A-212ENST00000600231 FAM168AQ92567 244 aa17.03■□□□□ 0.32
GRAMD1A-212ENST00000600231 A0A1B0GUS0 222 aa17.03■□□□□ 0.32
GRAMD1A-212ENST00000600231 UBE2G1P62253 170 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms