RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 IGHV3-49A0A0A0MS15 119 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 INMT-MINDY4F8WBC2 141 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 K7EPK0 472 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 SSSCA1O60232 199 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 DFFBO76075 338 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 CFDP00746 253 aaPredicted RBP13.1□□□□□ -0.31
USHBP1-209ENST00000598570 DEFA1P59665 94 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 DEFA3P59666 94 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 ZNF90Q03938 601 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 TCF24Q7RTU0 167 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 GGACTQ9BVM4 153 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 TUBA4BQ9H853 241 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 GPN1Q9HCN4 374 aaPredicted RBP13.1□□□□□ -0.31
USHBP1-209ENST00000598570 GSKIPQ9P0R6 139 aa13.1□□□□□ -0.31
USHBP1-209ENST00000598570 CCSO14618 274 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 IL4P05112 153 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 FABP1P07148 127 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
USHBP1-209ENST00000598570 DLK1P80370 383 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 MS4A6AQ9H2W1 248 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 SRD5A3Q9H8P0 318 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 SLC45A2Q9UMX9 530 aa13.09□□□□□ -0.31
USHBP1-209ENST00000598570 IGHV3OR16-13A0A075B7E8 117 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 IGHV3-74A0A0B4J1X5 117 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 ZFP92A6NM28 416 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 H3BP45 60 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 DEDDO75618 318 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 P2RY1P47900 373 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 DCANP1Q8TF63 244 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
USHBP1-209ENST00000598570 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
USHBP1-209ENST00000598570 K7EQG2 157 aa13.07□□□□□ -0.32
USHBP1-209ENST00000598570 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
USHBP1-209ENST00000598570 ARL16Q0P5N6 197 aa13.07□□□□□ -0.32
USHBP1-209ENST00000598570 C1orf194Q5T5A4 169 aa13.07□□□□□ -0.32
USHBP1-209ENST00000598570 GSG1LQ6UXU4 331 aa13.07□□□□□ -0.32
USHBP1-209ENST00000598570 ACOT7LQ6ZUV0 252 aa13.07□□□□□ -0.32
USHBP1-209ENST00000598570 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
USHBP1-209ENST00000598570 C5orf51A6NDU8 294 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 CCNKO75909 580 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-209ENST00000598570 AP2S1P53680 142 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-209ENST00000598570 PLP1P60201 277 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 TMEM182Q6ZP80 229 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-209ENST00000598570 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 NPVFQ9HCQ7 196 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 DNAH7Q8WXX0 4024 aa13.06□□□□□ -0.32
USHBP1-209ENST00000598570 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 HELTA6NFD8 242 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 METTL15P1P0C7V9 234 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 KIR2DL5BQ8NHK3 375 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 NARS2Q96I59 477 aaKnown RBP13.05□□□□□ -0.32
USHBP1-209ENST00000598570 RCHY1Q96PM5 261 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 SPATA25Q9BR10 227 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 NMES1Q9C002 83 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 ZMAT4Q9H898 229 aa13.05□□□□□ -0.32
USHBP1-209ENST00000598570 IGHV3-66A0A0C4DH42 116 aa13.04□□□□□ -0.32
USHBP1-209ENST00000598570 VWC2Q2TAL6 325 aa13.04□□□□□ -0.32
USHBP1-209ENST00000598570 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
USHBP1-209ENST00000598570 GGTLC1Q9BX51 225 aa13.04□□□□□ -0.32
USHBP1-209ENST00000598570 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
USHBP1-209ENST00000598570 LYRM2Q9NU23 88 aaPredicted RBP13.04□□□□□ -0.32
USHBP1-209ENST00000598570 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
USHBP1-209ENST00000598570 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-209ENST00000598570 FAM25EA8MYX2 175 aa13.03□□□□□ -0.32
USHBP1-209ENST00000598570 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
USHBP1-209ENST00000598570 PTTG1O95997 202 aa13.03□□□□□ -0.32
USHBP1-209ENST00000598570 H2BFSP57053 126 aa13.03□□□□□ -0.32
USHBP1-209ENST00000598570 SELENOTP62341 195 aa13.03□□□□□ -0.32
USHBP1-209ENST00000598570 RAB32Q13637 225 aa13.03□□□□□ -0.32
USHBP1-209ENST00000598570 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
USHBP1-209ENST00000598570 UBE2CO00762 179 aa13.02□□□□□ -0.33
USHBP1-209ENST00000598570 CYCSP99999 105 aaKnown RBP13.02□□□□□ -0.33
USHBP1-209ENST00000598570 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
USHBP1-209ENST00000598570 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
USHBP1-209ENST00000598570 EDA2RQ9HAV5 297 aa13.02□□□□□ -0.33
USHBP1-209ENST00000598570 UBQLN2Q9UHD9 624 aa13.02□□□□□ -0.33
USHBP1-209ENST00000598570 CYP2G1PQ6ZSU1 146 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 Q6ZWC4 215 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 WFDC3Q8IUB2 231 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 TMEM252Q8N6L7 170 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 BPIFCQ8NFQ6 507 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 FBXL17Q9UF56 701 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 TP53TG1Q9Y2A0 90 aa13.01□□□□□ -0.33
USHBP1-209ENST00000598570 LSM5Q9Y4Y9 91 aaKnown RBP13.01□□□□□ -0.33
USHBP1-209ENST00000598570 H0YIZ8 118 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 L7N2F9 121 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 DNASE2O00115 360 aaPredicted RBP13□□□□□ -0.33
USHBP1-209ENST00000598570 PVALBP20472 110 aaPredicted RBP13□□□□□ -0.33
USHBP1-209ENST00000598570 SULT1A1P50225 295 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 VAMP2P63027 116 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms