RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 HLA-DRB4X5D2U9 266 aa7.57□□□□□ -1.2
CHMP2A-202ENST00000596708 IGLV2-18A0A075B6J9 118 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 TMEM189A5PLL7 270 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 SMIM9A6NGZ8 99 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 DISC1C4P0D8 188 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 RTL8CO15255 209 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 PSG1P11464 419 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 ID1P41134 155 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 DEFB1P60022 68 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 GDF5OSQ5U4N7 250 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 OR4B1Q8NGF8 309 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 PFDN2Q9UHV9 154 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 DNAH17Q9UFH2 4485 aa7.56□□□□□ -1.2
CHMP2A-202ENST00000596708 GABARAPH6UMI1 98 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 GABARAPO95166 117 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 SULT1A3P0DMM9 295 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 SULT1A4P0DMN0 295 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 NUP62P37198 522 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 KLF9Q13886 244 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 LGALS9BQ3B8N2 356 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 GPR107Q5VW38 600 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 ZNF705AQ6ZN79 300 aaPredicted RBP7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 RNF125Q96EQ8 232 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 C7orf50Q9BRJ6 194 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 NIPSNAP3BQ9BS92 247 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 NAA50Q9GZZ1 169 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 GPR132Q9UNW8 380 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 KCNIP3Q9Y2W7 256 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 RFNGQ9Y644 331 aa7.55□□□□□ -1.2
CHMP2A-202ENST00000596708 DNAH2Q9P225 4427 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 TEX48A0A1B0GUV7 120 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 CRYM-AS1A6NIL9 109 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 ZNF705FA8MVS1 300 aaPredicted RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 RGS5O15539 181 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 ZNF705DP0CH99 300 aaPredicted RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 ZNF705BP0CI00 300 aaPredicted RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 HTN3P15516 51 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 SSBP1Q04837 148 aaKnown RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 SURF2Q15527 256 aaPredicted RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 NMSQ5H8A3 153 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 FAM222AQ5U5X8 452 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 LGI3Q8N145 548 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 PPP1R14BQ96C90 147 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 WDR12Q9GZL7 423 aaKnown RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 SAV1Q9H4B6 383 aaPredicted RBP7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 PLA2G2EQ9NZK7 142 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 CACFD1Q9UGQ2 172 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 TMEM56-RWDD3S4R434 201 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 U3KQ87 197 aa7.54□□□□□ -1.2
CHMP2A-202ENST00000596708 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 AKAIN1P0CW23 69 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 LYZP61626 148 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 MRPS10P82664 201 aaKnown RBP7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 SOHLH1Q5JUK2 328 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 OR8G2PQ6IF36 304 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 EBLN2Q6P2I7 272 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 GSG1LQ6UXU4 331 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 OR4C16Q8NGL9 310 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 DTD1Q8TEA8 209 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 SLC35E1Q96K37 410 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 FAM210BQ96KR6 192 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 RBKSQ9H477 322 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 PRR13Q9NZ81 148 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 DKK2Q9UBU2 259 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 GOLT1BQ9Y3E0 138 aa7.53□□□□□ -1.2
CHMP2A-202ENST00000596708 SNRPGP15A8MWD9 76 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 HBE1P02100 147 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 PSMB3P49720 205 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 CCR6P51684 374 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 PSG9Q00887 426 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 ZNF90Q03938 601 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 OR2F1Q13607 317 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 IL18Q14116 193 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 SMCO1Q147U7 214 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 CTF1Q16619 201 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 CLVS1Q8IUQ0 354 aaPredicted RBP7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 OR8I2Q8N0Y5 310 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 OR51S1Q8NGJ8 323 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 IL22RA2Q969J5 263 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 PRRT1Q99946 306 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 MAGT1Q9H0U3 335 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 SLC35B3Q9H1N7 401 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 MIXL1Q9H2W2 232 aa7.52□□□□□ -1.21
CHMP2A-202ENST00000596708 DYNC1H1Q14204 4646 aaKnown RBP7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 F6UB75 175 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 CTDSP2O14595 271 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 FABP1P07148 127 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 AKR1C4P17516 323 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 GPX4P36969 197 aaPredicted RBP7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 GAMTQ14353 236 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 RRN3P1Q2M238 152 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 RNF212Q495C1 297 aa7.51□□□□□ -1.21
CHMP2A-202ENST00000596708 FAM78BQ5VT40 261 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms