RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RNF183Q96D59 192 aa9.62□□□□□ -0.87
USE1-207ENST00000596136 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
USE1-207ENST00000596136 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
USE1-207ENST00000596136 MAGT1Q9H0U3 335 aa9.62□□□□□ -0.87
USE1-207ENST00000596136 RYR2Q92736 4967 aa9.62□□□□□ -0.87
USE1-207ENST00000596136 IGKV1OR2-108A0A075B7D4 117 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 HELTA6NFD8 242 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 A6NHS1 94 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 WRBO00258 174 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 SPRY2O43597 315 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 IFNA21P01568 189 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 AP2S1P53680 142 aaPredicted RBP9.61□□□□□ -0.87
USE1-207ENST00000596136 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
USE1-207ENST00000596136 FAM24BQ8N5W8 94 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 IL17DQ8TAD2 202 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 SLC35E1Q96K37 410 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 TRGV9Q99603 122 aa9.61□□□□□ -0.87
USE1-207ENST00000596136 AGRNO00468 2067 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 ZFP92A6NM28 416 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 TCRBP04435 133 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
USE1-207ENST00000596136 EIF2B2P49770 351 aaKnown RBP9.6□□□□□ -0.87
USE1-207ENST00000596136 DEFB131AP59861 70 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 ZNF90Q03938 601 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 C4orf46Q504U0 113 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 RNF125Q96EQ8 232 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 CSTL1Q9H114 145 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 C20orf85Q9H1P6 137 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 SEPSECSQ9HD40 501 aaKnown RBP9.6□□□□□ -0.87
USE1-207ENST00000596136 RABAC1Q9UI14 185 aa9.6□□□□□ -0.87
USE1-207ENST00000596136 FABP1P07148 127 aa9.59□□□□□ -0.87
USE1-207ENST00000596136 NKX2-1P43699 371 aaPredicted RBP9.59□□□□□ -0.87
USE1-207ENST00000596136 POLR2GP62487 172 aaKnown RBP eCLIP9.59□□□□□ -0.87
USE1-207ENST00000596136 DEFB135Q30KP9 77 aa9.59□□□□□ -0.87
USE1-207ENST00000596136 ZFAND6Q6FIF0 208 aa9.59□□□□□ -0.87
USE1-207ENST00000596136 STXBP6Q8NFX7 210 aa9.59□□□□□ -0.87
USE1-207ENST00000596136 SMIM8Q96KF7 97 aa9.59□□□□□ -0.87
USE1-207ENST00000596136 STRAPQ9Y3F4 350 aaKnown RBP9.59□□□□□ -0.87
USE1-207ENST00000596136 PMS2P5A8MQ11 134 aa9.58□□□□□ -0.88
USE1-207ENST00000596136 SNRPGP15A8MWD9 76 aa9.58□□□□□ -0.88
USE1-207ENST00000596136 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
USE1-207ENST00000596136 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
USE1-207ENST00000596136 PAX9P55771 341 aa9.58□□□□□ -0.88
USE1-207ENST00000596136 SPANXN5Q5MJ07 72 aa9.58□□□□□ -0.88
USE1-207ENST00000596136 C1orf194Q5T5A4 169 aa9.58□□□□□ -0.88
USE1-207ENST00000596136 S100ZQ8WXG8 99 aa9.58□□□□□ -0.88
USE1-207ENST00000596136 PLECQ15149 4684 aaKnown RBP9.57□□□□□ -0.88
USE1-207ENST00000596136 CFDP00746 253 aaPredicted RBP9.57□□□□□ -0.88
USE1-207ENST00000596136 TAS2R30P59541 319 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 IAH1Q2TAA2 248 aaPredicted RBP9.57□□□□□ -0.88
USE1-207ENST00000596136 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 TMEM14EPQ6UXP3 125 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 SIGLEC15Q6ZMC9 328 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 ZBTB8BQ8NAP8 495 aaPredicted RBP9.57□□□□□ -0.88
USE1-207ENST00000596136 GATAD1Q8WUU5 269 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 NRN1Q9NPD7 142 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 PFDN2Q9UHV9 154 aa9.57□□□□□ -0.88
USE1-207ENST00000596136 H3BP45 60 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
USE1-207ENST00000596136 ZNF431Q8TF32 576 aaPredicted RBP9.56□□□□□ -0.88
USE1-207ENST00000596136 RAB40CQ96S21 281 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 NUDT15Q9NV35 164 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 TBC1D24Q9ULP9 559 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 PAIP2BQ9ULR5 123 aaKnown RBP9.56□□□□□ -0.88
USE1-207ENST00000596136 SLC45A2Q9UMX9 530 aa9.56□□□□□ -0.88
USE1-207ENST00000596136 TRAV6A0A075B6T7 132 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 A0A0J9YWU9 116 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 FNDC10F2Z333 226 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 SSSCA1O60232 199 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 TSC22D2O75157 780 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 GIG44P09565 113 aaPredicted RBP9.55□□□□□ -0.88
USE1-207ENST00000596136 ASAH1Q13510 395 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 OR2F1Q13607 317 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 ACOT7LQ6ZUV0 252 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 STHQ8IWL8 128 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 PBDC1Q9BVG4 233 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 FBXL17Q9UF56 701 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 RCL1Q9Y2P8 373 aaKnown RBP9.55□□□□□ -0.88
USE1-207ENST00000596136 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
USE1-207ENST00000596136 LCE6AA0A183 80 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 FAM240BA0A1B0GVZ2 78 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 MBPP02686 304 aaPredicted RBP9.54□□□□□ -0.88
USE1-207ENST00000596136 H2AFB2P0C5Z0 115 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 SPP1P10451 314 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 LYZP61626 148 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 DLK1P80370 383 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
USE1-207ENST00000596136 TMEM41BQ5BJD5 291 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 MORN3Q6PF18 240 aaPredicted RBP9.54□□□□□ -0.88
USE1-207ENST00000596136 TMEM182Q6ZP80 229 aaPredicted RBP9.54□□□□□ -0.88
USE1-207ENST00000596136 PTTG2Q9NZH5 202 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 GSKIPQ9P0R6 139 aa9.54□□□□□ -0.88
USE1-207ENST00000596136 C7orf66A4D0T2 115 aa9.53□□□□□ -0.88
USE1-207ENST00000596136 KNCNA6PVL3 124 aa9.53□□□□□ -0.88
USE1-207ENST00000596136 SOCS3O14543 225 aa9.53□□□□□ -0.88
USE1-207ENST00000596136 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms