RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SPSB3Q6PJ21 355 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 Q6ZRG5 221 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 OR10G4Q8NGN3 311 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 OR10G9Q8NGN4 311 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 OR10G7Q8NGN6 311 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 OR4F5Q8NH21 305 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 FAM213BQ8TBF2 198 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 CUBNO60494 3623 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 WI2-2373I1.2A0A1W2PRP0 233 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 SCGB2A1O75556 95 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 OR2C1O95371 312 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 IGHV3-11P01762 117 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 RD3LP0DJH9 198 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 SRSF2Q01130 221 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 FAM209BQ5JX69 171 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 SSX7Q7RTT5 188 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 MBD3L1Q8WWY6 194 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 TMEM37Q8WXS4 190 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 RCC1LQ96I51 464 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 UBE2E2Q96LR5 201 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 C19orf24Q9BVV8 132 aa11.38□□□□□ -0.59
SHKBP1-211ENST00000595945 NUPL2O15504 423 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 TRBV12-3P01733 135 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 OR5G3P0C626 314 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 PROK1P58294 105 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 FAM122CQ6P4D5 195 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 GNB4Q9HAV0 340 aa11.37□□□□□ -0.59
SHKBP1-211ENST00000595945 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 CTXND1A0A1B0GTU2 59 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 CLPSL1A2RUU4 121 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 BMPR1BO00238 502 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 LGALS1P09382 135 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 ARL3P36405 182 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 OR1L4Q8NGR5 311 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 Q8WTZ3 238 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 GATAD1Q8WUU5 269 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 WFDC12Q8WWY7 111 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 PFDN5Q99471 154 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 RNF2Q99496 336 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 DNAJC4Q9NNZ3 241 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 MRPL27Q9P0M9 148 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 WNK1Q9H4A3 2382 aa11.36□□□□□ -0.59
SHKBP1-211ENST00000595945 ELOA3CA0A087WX78 387 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 HYPMO75409 117 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 CDX1P47902 265 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 RNF125Q96EQ8 232 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 DOK5Q9P104 306 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 RNF114Q9Y508 228 aa11.35□□□□□ -0.59
SHKBP1-211ENST00000595945 ANKRD34BA5PLL1 514 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 LINC00862A6NCI5 91 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 I3L521 148 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 COX7A2P2O60397 106 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 IL4P05112 153 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 LYZP61626 148 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 RHOBP62745 196 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 RELQ04864 619 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 USF2Q15853 346 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 C10orf113Q5VZT2 155 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 RAB24Q969Q5 203 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 MRPL32Q9BYC8 188 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 SLC25A22Q9H936 323 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHKBP1-211ENST00000595945 TENM1Q9UKZ4 2725 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 A0A1B0GUS0 222 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 MAP1LC3B2A6NCE7 125 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 GGCTO75223 188 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 ORM2P19652 201 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 FAM78BQ5VT40 261 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 LCN15Q6UWW0 184 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 OR5B12Q96R08 314 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 MAP1LC3BQ9GZQ8 125 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 HIGD1AQ9Y241 93 aa11.33□□□□□ -0.6
SHKBP1-211ENST00000595945 A0A1W2PPV4 95 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 H3BRN7 92 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 NDUFA4O00483 81 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 HBE1P02100 147 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 CD28P10747 220 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 CCL20P78556 96 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms