RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 NDUFA7O95182 113 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 RD3LP0DJH9 198 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 M6PRP20645 277 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 PSMB8P28062 276 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 YPEL3P61236 119 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 CLLU1Q5K131 121 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 KLHDC1Q8N7A1 406 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 OR5AU1Q8NGC0 362 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 PCNPQ8WW12 178 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 ACTR3CQ9C0K3 210 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 VSIRQ9H7M9 311 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
SHKBP1-209ENST00000595803 WNK1Q9H4A3 2382 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 A0A1W2PPV4 95 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 YIF1AO95070 293 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 TOMM40O96008 361 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 CTSGP08311 255 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 GPR183P32249 361 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 RAB2AP61019 212 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 FAM209BQ5JX69 171 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 FAM122CQ6P4D5 195 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 LCNL1Q6ZST4 164 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 OR4X2Q8NGF9 303 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 OR1L4Q8NGR5 311 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 GNB4Q9HAV0 340 aa10.12□□□□□ -0.79
SHKBP1-209ENST00000595803 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 ANKRD34BA5PLL1 514 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 TGOLN2O43493 480 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 RPLP1P05386 114 aaKnown RBP10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 PSG1P11464 419 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 PXDC1Q5TGL8 231 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 ZNF343Q6P1L6 599 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 SPSB3Q6PJ21 355 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 OR51G1Q8NGK1 321 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 LINC01006Q8NI28 216 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 DNAJC4Q9NNZ3 241 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 RYR3Q15413 4870 aa10.11□□□□□ -0.79
SHKBP1-209ENST00000595803 TEX46H3BTG2 121 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 COX7A2P2O60397 106 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 HYPMO75409 117 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 NMBP08949 121 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 H2AFB1P0C5Y9 115 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 OR5G3P0C626 314 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 ORM2P19652 201 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 ARL3P36405 182 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 FHITP49789 147 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 RHOBP62745 196 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 KIAA0141Q14154 515 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 AWAT1Q58HT5 328 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 GCSAMLQ5JQS6 135 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 ZNF600Q6ZNG1 722 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 OR1B1Q8NGR6 318 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 GATAD1Q8WUU5 269 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 CCDC140Q96MF4 163 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 PFDN5Q99471 154 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 RNF2Q99496 336 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 CHRDL1Q9BU40 450 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 DOK5Q9P104 306 aa10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 PEF1Q9UBV8 284 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-209ENST00000595803 ELOA3CA0A087WX78 387 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 CLPSL1A2RUU4 121 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 ADMP35318 185 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 CDC34P49427 236 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 PLP1P60201 277 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 LYZP61626 148 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 RELQ04864 619 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 C10orf113Q5VZT2 155 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 SFT2D1Q8WV19 159 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 MBD3L1Q8WWY6 194 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 UBE2E2Q96LR5 201 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 OR5B12Q96R08 314 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 PBDC1Q9BVG4 233 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 HRH4Q9H3N8 390 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 RNF114Q9Y508 228 aa10.09□□□□□ -0.79
SHKBP1-209ENST00000595803 CTXND1A0A1B0GTU2 59 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 WI2-2373I1.2A0A1W2PRP0 233 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 PPP5D1E7EU14 171 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 HBE1P02100 147 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 FAM78BQ5VT40 261 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 LCN15Q6UWW0 184 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 S100A7AQ86SG5 101 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 TMEM37Q8WXS4 190 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 PFDN2Q9UHV9 154 aa10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
SHKBP1-209ENST00000595803 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 SEC14L6B5MCN3 397 aa10.07□□□□□ -0.8
SHKBP1-209ENST00000595803 GGCTO75223 188 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms