RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 RYR3Q15413 4870 aa16.44■□□□□ 0.22
GTF2F1-204ENST00000594965 SPRY2O43597 315 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 C4orf46Q504U0 113 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 LEMD1Q68G75 181 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 STPG3Q8N7X2 389 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 STXBP6Q8NFX7 210 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 OR51G1Q8NGK1 321 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 GRAMD2BQ96HH9 432 aa16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 PAIP2BQ9ULR5 123 aaKnown RBP16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 DYNC2H1Q8NCM8 4307 aaKnown RBP16.43■□□□□ 0.22
GTF2F1-204ENST00000594965 IGKV1OR2-108A0A075B7D4 117 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 ZFP92A6NM28 416 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 BUB3O43684 328 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 POLR2GP62487 172 aaKnown RBP eCLIP16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 CNPY1Q3B7I2 92 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 RNF183Q96D59 192 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 RNF125Q96EQ8 232 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 C20orf85Q9H1P6 137 aa16.42■□□□□ 0.22
GTF2F1-204ENST00000594965 A6NHS1 94 aa16.41■□□□□ 0.22
GTF2F1-204ENST00000594965 SPANXN5Q5MJ07 72 aa16.41■□□□□ 0.22
GTF2F1-204ENST00000594965 LINC00299Q6ZSB3 139 aa16.41■□□□□ 0.22
GTF2F1-204ENST00000594965 MITD1Q8WV92 249 aa16.41■□□□□ 0.22
GTF2F1-204ENST00000594965 CCDC32Q9BV29 185 aa16.41■□□□□ 0.22
GTF2F1-204ENST00000594965 H3BP45 60 aa16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 IFNA21P01568 189 aa16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 TCRBP04435 133 aa16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 RPP30P78346 268 aaKnown RBP16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 THAP8Q8NA92 274 aa16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 TRGV9Q99603 122 aa16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 CSTL1Q9H114 145 aa16.4■□□□□ 0.22
GTF2F1-204ENST00000594965 HELTA6NFD8 242 aa16.39■□□□□ 0.21
GTF2F1-204ENST00000594965 NKX2-1P43699 371 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-204ENST00000594965 TRAV6A0A075B6T7 132 aa16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 PMS2P5A8MQ11 134 aa16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 ZNF688P0C7X2 276 aa16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 EIF2B2P49770 351 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 AP2S1P53680 142 aaPredicted RBP16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 PAX9P55771 341 aa16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 OR2F1Q13607 317 aa16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 STRAPQ9Y3F4 350 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-204ENST00000594965 OR8G2PQ6IF36 304 aa16.37■□□□□ 0.21
GTF2F1-204ENST00000594965 PBDC1Q9BVG4 233 aa16.37■□□□□ 0.21
GTF2F1-204ENST00000594965 PSENENQ9NZ42 101 aa16.37■□□□□ 0.21
GTF2F1-204ENST00000594965 LYSTQ99698 3801 aa16.37■□□□□ 0.21
GTF2F1-204ENST00000594965 A0A0J9YWU9 116 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 SSSCA1O60232 199 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 IAH1Q2TAA2 248 aaPredicted RBP16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 SIGLEC15Q6ZMC9 328 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 ZBTB8BQ8NAP8 495 aaPredicted RBP16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 IL17DQ8TAD2 202 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 SMIM8Q96KF7 97 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 NUDT15Q9NV35 164 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 TBC1D24Q9ULP9 559 aa16.36■□□□□ 0.21
GTF2F1-204ENST00000594965 SNRPGP15A8MWD9 76 aa16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 CCNKO75909 580 aa16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 FABP1P07148 127 aa16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 LYZP61626 148 aa16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 TMEM182Q6ZP80 229 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 ACOT7LQ6ZUV0 252 aa16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 SEC22CQ9BRL7 303 aa16.35■□□□□ 0.21
GTF2F1-204ENST00000594965 KNCNA6PVL3 124 aa16.34■□□□□ 0.21
GTF2F1-204ENST00000594965 TRPT1Q86TN4 253 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-204ENST00000594965 S100ZQ8WXG8 99 aa16.34■□□□□ 0.21
GTF2F1-204ENST00000594965 NRN1Q9NPD7 142 aa16.34■□□□□ 0.21
GTF2F1-204ENST00000594965 RCL1Q9Y2P8 373 aaKnown RBP16.34■□□□□ 0.21
GTF2F1-204ENST00000594965 TENM2Q9NT68 2774 aa16.33■□□□□ 0.21
GTF2F1-204ENST00000594965 SACSQ9NZJ4 4579 aa16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 CCSO14618 274 aa16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 SCGB1D2O95969 90 aa16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 GIG44P09565 113 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 TMEM14EPQ6UXP3 125 aa16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 STHQ8IWL8 128 aa16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 ZNF431Q8TF32 576 aaPredicted RBP16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 GSKIPQ9P0R6 139 aa16.33■□□□□ 0.2
GTF2F1-204ENST00000594965 CA1P00915 261 aaPredicted RBP16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 H2AFB2P0C5Z0 115 aa16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 GATA2P23769 480 aaPredicted RBP16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 NUP62P37198 522 aaPredicted RBP16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 PSMG4Q5JS54 123 aa16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 TMEM144Q7Z5S9 345 aa16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 GATAD1Q8WUU5 269 aa16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 SEPSECSQ9HD40 501 aaKnown RBP16.32■□□□□ 0.2
GTF2F1-204ENST00000594965 LCE6AA0A183 80 aa16.31■□□□□ 0.2
GTF2F1-204ENST00000594965 MBPP02686 304 aaPredicted RBP16.31■□□□□ 0.2
GTF2F1-204ENST00000594965 AKR1C1Q04828 323 aa16.31■□□□□ 0.2
GTF2F1-204ENST00000594965 ASAH1Q13510 395 aa16.31■□□□□ 0.2
GTF2F1-204ENST00000594965 RAB40CQ96S21 281 aa16.31■□□□□ 0.2
GTF2F1-204ENST00000594965 FAM240BA0A1B0GVZ2 78 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 METTL15P1P0C7V9 234 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 ACTL10Q5JWF8 245 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 C1orf194Q5T5A4 169 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 GSG1LQ6UXU4 331 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 RARRES2Q99969 163 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 WDR12Q9GZL7 423 aaKnown RBP16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 PTTG2Q9NZH5 202 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
GTF2F1-204ENST00000594965 TSC22D2O75157 780 aa16.29■□□□□ 0.2
GTF2F1-204ENST00000594965 CFDP00746 253 aaPredicted RBP16.29■□□□□ 0.2
GTF2F1-204ENST00000594965 C4BPBP20851 252 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms