RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CAV2P51636 162 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 GRAMD2BQ96HH9 432 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 B9D2Q9BPU9 175 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 NEURL2Q9BR09 285 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 NPVFQ9HCQ7 196 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 LYRM2Q9NU23 88 aaPredicted RBP19.35■□□□□ 0.69
TRIM28-204ENST00000594806 MGAT4CQ9UBM8 478 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 ALG5Q9Y673 324 aa19.35■□□□□ 0.69
TRIM28-204ENST00000594806 IGKV1OR2-108A0A075B7D4 117 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 IGHV3-49A0A0A0MS15 119 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 DEDDO75618 318 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 CD81P60033 236 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 ST8SIA2Q92186 375 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 RNF125Q96EQ8 232 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 U3KQE9 123 aa19.34■□□□□ 0.69
TRIM28-204ENST00000594806 NUP62P37198 522 aaPredicted RBP19.33■□□□□ 0.68
TRIM28-204ENST00000594806 H2BFSP57053 126 aa19.33■□□□□ 0.68
TRIM28-204ENST00000594806 ZNF90Q03938 601 aa19.33■□□□□ 0.68
TRIM28-204ENST00000594806 FAM90A2PQ658T7 463 aa19.33■□□□□ 0.68
TRIM28-204ENST00000594806 RABAC1Q9UI14 185 aa19.33■□□□□ 0.68
TRIM28-204ENST00000594806 SMCO3A2RU48 225 aa19.32■□□□□ 0.68
TRIM28-204ENST00000594806 OR4C46A6NHA9 309 aa19.32■□□□□ 0.68
TRIM28-204ENST00000594806 CCNKO75909 580 aa19.32■□□□□ 0.68
TRIM28-204ENST00000594806 APOHP02749 345 aaPredicted RBP19.32■□□□□ 0.68
TRIM28-204ENST00000594806 PAFAH1B2P68402 229 aa19.32■□□□□ 0.68
TRIM28-204ENST00000594806 USF2Q15853 346 aaPredicted RBP19.32■□□□□ 0.68
TRIM28-204ENST00000594806 SELENOKQ9Y6D0 94 aa19.32■□□□□ 0.68
TRIM28-204ENST00000594806 IGHV3OR16-13A0A075B7E8 117 aa19.31■□□□□ 0.68
TRIM28-204ENST00000594806 IGHV3-74A0A0B4J1X5 117 aa19.31■□□□□ 0.68
TRIM28-204ENST00000594806 FAM24AA6NFZ4 105 aa19.31■□□□□ 0.68
TRIM28-204ENST00000594806 E5RGE8 158 aa19.31■□□□□ 0.68
TRIM28-204ENST00000594806 EIF2B2P49770 351 aaKnown RBP19.31■□□□□ 0.68
TRIM28-204ENST00000594806 TCF24Q7RTU0 167 aa19.31■□□□□ 0.68
TRIM28-204ENST00000594806 STX12Q86Y82 276 aa19.31■□□□□ 0.68
TRIM28-204ENST00000594806 CD7P09564 240 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 PET100P0DJ07 73 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 IGHV4-30-4P0DP06 118 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 SULT1A1P50225 295 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 CMC4P56277 68 aaPredicted RBP19.3■□□□□ 0.68
TRIM28-204ENST00000594806 RRAS2P62070 204 aaPredicted RBP19.3■□□□□ 0.68
TRIM28-204ENST00000594806 SELENOTP62341 195 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 TMEM252Q8N6L7 170 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 BPIFCQ8NFQ6 507 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 FAM110AQ9BQ89 295 aa19.3■□□□□ 0.68
TRIM28-204ENST00000594806 TRAV2A0A0B4J234 112 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 S100A7P31151 101 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 S100A11P31949 105 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 P2RY1P47900 373 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 AP2S1P53680 142 aaPredicted RBP19.29■□□□□ 0.68
TRIM28-204ENST00000594806 HBG1P69891 147 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 HBG2P69892 147 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 SLC38A11Q08AI6 406 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 ARL16Q0P5N6 197 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 OXA1LQ15070 435 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 TEPPQ6URK8 271 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 PPP1R1CQ8WVI7 109 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 SLC25A31Q9H0C2 315 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 C19orf73Q9NVV2 129 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 SLC45A2Q9UMX9 530 aa19.29■□□□□ 0.68
TRIM28-204ENST00000594806 HELTA6NFD8 242 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 OR11H12B2RN74 326 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 DFFBO76075 338 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 OR2F1Q13607 317 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 C16orf54Q6UWD8 224 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 LILRB2Q8N423 598 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 PBDC1Q9BVG4 233 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 MED28Q9H204 178 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 TUBA4BQ9H853 241 aa19.28■□□□□ 0.68
TRIM28-204ENST00000594806 IGHV3-66A0A0C4DH42 116 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 BUB3O43684 328 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 CST7O76096 145 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 FRMD6-AS1P0C7T7 363 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 NHLRC4P0CG21 123 aaPredicted RBP19.27■□□□□ 0.68
TRIM28-204ENST00000594806 LYZP61626 148 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 ATP6V1FQ16864 119 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 LRRC37A5PQ49AS3 106 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 CYP2G1PQ6ZSU1 146 aa19.27■□□□□ 0.68
TRIM28-204ENST00000594806 IGSF23A1L1A6 192 aa19.25■□□□□ 0.67
TRIM28-204ENST00000594806 MPC2O95563 127 aa19.25■□□□□ 0.67
TRIM28-204ENST00000594806 RPL11P62913 178 aaKnown RBP19.25■□□□□ 0.67
TRIM28-204ENST00000594806 C1orf194Q5T5A4 169 aa19.25■□□□□ 0.67
TRIM28-204ENST00000594806 TMEM217Q8N7C4 229 aa19.25■□□□□ 0.67
TRIM28-204ENST00000594806 GLMPQ8WWB7 406 aa19.25■□□□□ 0.67
TRIM28-204ENST00000594806 H0YIZ8 118 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 DNASE2O00115 360 aaPredicted RBP19.24■□□□□ 0.67
TRIM28-204ENST00000594806 RAB31Q13636 194 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 VWC2Q2TAL6 325 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 ASB13Q8WXK3 278 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 MS4A6AQ9H2W1 248 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 UQCC1Q9NVA1 299 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 OR5AC2Q9NZP5 309 aa19.24■□□□□ 0.67
TRIM28-204ENST00000594806 PLP1P60201 277 aa19.23■□□□□ 0.67
TRIM28-204ENST00000594806 BAXQ07812 192 aa19.23■□□□□ 0.67
TRIM28-204ENST00000594806 S100A7AQ86SG5 101 aa19.23■□□□□ 0.67
TRIM28-204ENST00000594806 ZNF546Q86UE3 836 aa19.23■□□□□ 0.67
TRIM28-204ENST00000594806 TMEM147Q9BVK8 224 aa19.23■□□□□ 0.67
TRIM28-204ENST00000594806 FBXL17Q9UF56 701 aa19.23■□□□□ 0.67
TRIM28-204ENST00000594806 CXCL3P19876 107 aa19.22■□□□□ 0.67
TRIM28-204ENST00000594806 PXDC1Q5TGL8 231 aa19.22■□□□□ 0.67
TRIM28-204ENST00000594806 DEFB125Q8N687 156 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms