RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
USE1-205ENST00000594724 GLMPQ8WWB7 406 aa10.88□□□□□ -0.67
USE1-205ENST00000594724 DNAH7Q8WXX0 4024 aa10.88□□□□□ -0.67
USE1-205ENST00000594724 H3BP45 60 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 K7EQG2 157 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 UBE2CO00762 179 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 RPP30P78346 268 aaKnown RBP10.87□□□□□ -0.67
USE1-205ENST00000594724 RNF125Q96EQ8 232 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 CSTL1Q9H114 145 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 C20orf85Q9H1P6 137 aa10.87□□□□□ -0.67
USE1-205ENST00000594724 TRAV6A0A075B6T7 132 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 PRSS46E5RG02 174 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 BUB3O43684 328 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 TCRBP04435 133 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 NKX2-1P43699 371 aaPredicted RBP10.86□□□□□ -0.67
USE1-205ENST00000594724 OR2F1Q13607 317 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 CNPY1Q3B7I2 92 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 OR4D5Q8NGN0 318 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 DCANP1Q8TF63 244 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 RNF183Q96D59 192 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 CCDC32Q9BV29 185 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 TP53TG1Q9Y2A0 90 aa10.86□□□□□ -0.67
USE1-205ENST00000594724 STRAPQ9Y3F4 350 aaKnown RBP10.86□□□□□ -0.67
USE1-205ENST00000594724 HELTA6NFD8 242 aa10.85□□□□□ -0.67
USE1-205ENST00000594724 A6NHS1 94 aa10.85□□□□□ -0.67
USE1-205ENST00000594724 ZNF688P0C7X2 276 aa10.85□□□□□ -0.67
USE1-205ENST00000594724 EIF2B2P49770 351 aaKnown RBP10.85□□□□□ -0.67
USE1-205ENST00000594724 LYZP61626 148 aa10.85□□□□□ -0.67
USE1-205ENST00000594724 IAH1Q2TAA2 248 aaPredicted RBP10.85□□□□□ -0.67
USE1-205ENST00000594724 MITD1Q8WV92 249 aa10.85□□□□□ -0.67
USE1-205ENST00000594724 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
USE1-205ENST00000594724 A0A0J9YWU9 116 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 SNRPGP15A8MWD9 76 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 SSSCA1O60232 199 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 SCGB1D2O95969 90 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 AP2S1P53680 142 aaPredicted RBP10.84□□□□□ -0.67
USE1-205ENST00000594724 PAX9P55771 341 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 THAP8Q8NA92 274 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 TRGV9Q99603 122 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 SEC22CQ9BRL7 303 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 GSKIPQ9P0R6 139 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 RYR3Q15413 4870 aa10.84□□□□□ -0.67
USE1-205ENST00000594724 CCSO14618 274 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 CCNKO75909 580 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 FABP1P07148 127 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 EWSR1Q01844 656 aaKnown RBP eCLIP10.83□□□□□ -0.68
USE1-205ENST00000594724 SIGLEC15Q6ZMC9 328 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 LINC00299Q6ZSB3 139 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 STHQ8IWL8 128 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 ZBTB8BQ8NAP8 495 aaPredicted RBP10.83□□□□□ -0.68
USE1-205ENST00000594724 IL17DQ8TAD2 202 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 S100ZQ8WXG8 99 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 SMIM8Q96KF7 97 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 NUDT15Q9NV35 164 aa10.83□□□□□ -0.68
USE1-205ENST00000594724 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
USE1-205ENST00000594724 H2AFB2P0C5Z0 115 aa10.82□□□□□ -0.68
USE1-205ENST00000594724 GATA2P23769 480 aaPredicted RBP10.82□□□□□ -0.68
USE1-205ENST00000594724 OR8G2PQ6IF36 304 aa10.82□□□□□ -0.68
USE1-205ENST00000594724 GSG1LQ6UXU4 331 aa10.82□□□□□ -0.68
USE1-205ENST00000594724 TMEM182Q6ZP80 229 aaPredicted RBP10.82□□□□□ -0.68
USE1-205ENST00000594724 ACOT7LQ6ZUV0 252 aa10.82□□□□□ -0.68
USE1-205ENST00000594724 TBC1D24Q9ULP9 559 aa10.82□□□□□ -0.68
USE1-205ENST00000594724 FAM240BA0A1B0GVZ2 78 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 SMCO3A2RU48 225 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 AKR1C1Q04828 323 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 PSMG4Q5JS54 123 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 ACTL10Q5JWF8 245 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 ZNF431Q8TF32 576 aaPredicted RBP10.81□□□□□ -0.68
USE1-205ENST00000594724 PPP1R14BQ96C90 147 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 RAB40CQ96S21 281 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 NRN1Q9NPD7 142 aa10.81□□□□□ -0.68
USE1-205ENST00000594724 STARD9Q9P2P6 4700 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 FAM25EA8MYX2 175 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 MBPP02686 304 aaPredicted RBP10.8□□□□□ -0.68
USE1-205ENST00000594724 METTL15P1P0C7V9 234 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 RRAS2P62070 204 aaPredicted RBP10.8□□□□□ -0.68
USE1-205ENST00000594724 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 TRPT1Q86TN4 253 aaKnown RBP10.8□□□□□ -0.68
USE1-205ENST00000594724 RARRES2Q99969 163 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 PFDN2Q9UHV9 154 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 RCL1Q9Y2P8 373 aaKnown RBP10.8□□□□□ -0.68
USE1-205ENST00000594724 CSMD3Q7Z407 3707 aa10.8□□□□□ -0.68
USE1-205ENST00000594724 GIG44P09565 113 aaPredicted RBP10.79□□□□□ -0.68
USE1-205ENST00000594724 ORM2P19652 201 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 NUP62P37198 522 aaPredicted RBP10.79□□□□□ -0.68
USE1-205ENST00000594724 SNRPD3P62318 126 aaKnown RBP10.79□□□□□ -0.68
USE1-205ENST00000594724 ZNF846Q147U1 533 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 MZT2BQ6NZ67 158 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 C12orf45Q8N5I9 185 aaPredicted RBP10.79□□□□□ -0.68
USE1-205ENST00000594724 BPIFCQ8NFQ6 507 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 OR11H2Q8NH07 326 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 GATAD1Q8WUU5 269 aa10.79□□□□□ -0.68
USE1-205ENST00000594724 WDR12Q9GZL7 423 aaKnown RBP10.79□□□□□ -0.68
USE1-205ENST00000594724 DYNC2H1Q8NCM8 4307 aaKnown RBP10.79□□□□□ -0.68
USE1-205ENST00000594724 TENM2Q9NT68 2774 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms