RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TCTEX1D1Q8N7M0 179 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 OR4X1Q8NH49 305 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 RNASE11Q8TAA1 199 aaKnown RBP15.36■□□□□ 0.05
LSM4-203ENST00000593829 VSTM2AQ8TAG5 236 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 C2orf88Q9BSF0 95 aa15.36■□□□□ 0.05
LSM4-203ENST00000593829 WDR61Q9GZS3 305 aaKnown RBP15.36■□□□□ 0.05
LSM4-203ENST00000593829 G3V318 75 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 TMEM250H0YL14 139 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 CRIP2P52943 208 aaPredicted RBP15.35■□□□□ 0.05
LSM4-203ENST00000593829 PRSS8Q16651 343 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 LCN15Q6UWW0 184 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 ARPC1AQ92747 370 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 RHOVQ96L33 236 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 PSENENQ9NZ42 101 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 TSSC4Q9Y5U2 329 aaPredicted RBP15.35■□□□□ 0.05
LSM4-203ENST00000593829 KBTBD11O94819 623 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 EGR2P11161 476 aaPredicted RBP15.35■□□□□ 0.05
LSM4-203ENST00000593829 TAS2R60P59551 318 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 MRGPRG-AS1Q2M3A8 158 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 PDZD11Q5EBL8 140 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 HAPLN4Q86UW8 402 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 ACY3Q96HD9 319 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 VSIRQ9H7M9 311 aa15.35■□□□□ 0.05
LSM4-203ENST00000593829 MAP1LC3B2A6NCE7 125 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 NXPH3O95157 252 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 IGKV1-39P01597 117 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 IGHG4P01861 327 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 IGKV1D-39P04432 117 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 PPIFP30405 207 aaKnown RBP15.34■□□□□ 0.05
LSM4-203ENST00000593829 SSBP2P81877 361 aaPredicted RBP15.34■□□□□ 0.05
LSM4-203ENST00000593829 ARL16Q0P5N6 197 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 FOXE3Q13461 319 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 ECSCRQ19T08 205 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 KHDC1LQ5JSQ8 128 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 Q6ZRM9 215 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 OR1P1Q8NH06 330 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 RAB24Q969Q5 203 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 FAM103A1Q9BTL3 118 aaKnown RBP15.34■□□□□ 0.05
LSM4-203ENST00000593829 MAP1LC3BQ9GZQ8 125 aa15.34■□□□□ 0.05
LSM4-203ENST00000593829 CEBPZOSA8MTT3 80 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 ADARB2-AS1A8MUL3 147 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 H3BP45 60 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 ELANEP08246 267 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 TMEM241Q24JQ0 296 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 SSX7Q7RTT5 188 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 MMD2Q8IY49 270 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 ZNF430Q9H8G1 570 aaPredicted RBP15.33■□□□□ 0.05
LSM4-203ENST00000593829 CACNG5Q9UF02 275 aa15.33■□□□□ 0.05
LSM4-203ENST00000593829 A0A1W2PRX2 142 aa15.33■□□□□ 0.04
LSM4-203ENST00000593829 S1PR2O95136 353 aa15.33■□□□□ 0.04
LSM4-203ENST00000593829 GCGP01275 180 aa15.33■□□□□ 0.04
LSM4-203ENST00000593829 TNXAQ16473 311 aa15.33■□□□□ 0.04
LSM4-203ENST00000593829 PLXNB1O43157 2135 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 ACTL6BO94805 426 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 AMBPP02760 352 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 MEF2BQ02080 365 aaPredicted RBP15.32■□□□□ 0.04
LSM4-203ENST00000593829 POU2AF1Q16633 256 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 C19orf54Q5BKX5 351 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 UNQ5815/PRO19632Q6UWF5 114 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 RNF152Q8N8N0 203 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 OR51G1Q8NGK1 321 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 TMEM167AQ8TBQ9 72 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 RBKSQ9H477 322 aa15.32■□□□□ 0.04
LSM4-203ENST00000593829 IGKV1-5P01602 117 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 METTL15P1P0C7V9 234 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 GZMBP10144 247 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 FAM3BP58499 235 aaPredicted RBP15.31■□□□□ 0.04
LSM4-203ENST00000593829 BSXQ3C1V8 233 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 ZNF585BQ52M93 769 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 OR4A47Q6IF82 309 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 SMIM7Q9BQ49 75 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 FOXA2Q9Y261 457 aaPredicted RBP15.31■□□□□ 0.04
LSM4-203ENST00000593829 A0A1B0GV90 55 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 A0A1W2PN81 502 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 IGLV1-40P01703 118 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 TYMSP04818 313 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 RPLP1P05386 114 aaKnown RBP15.31■□□□□ 0.04
LSM4-203ENST00000593829 PSMB8P28062 276 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 CHRNA7P36544 502 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 ERVK-16P61578 105 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 ATP6V1FQ16864 119 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 TMEM14EPQ6UXP3 125 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 LILRB2Q8N423 598 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 OR4A5Q8NH83 315 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 TMEM170AQ8WVE7 144 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 R3HDM4Q96D70 268 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 ANAPC16Q96DE5 110 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 OR4C12Q96R67 309 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 BET1LQ9NYM9 111 aa15.31■□□□□ 0.04
LSM4-203ENST00000593829 A8MWP6 167 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 MBP02144 154 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 FGF8P55075 233 aaPredicted RBP15.3■□□□□ 0.04
LSM4-203ENST00000593829 RPL23P62829 140 aaKnown RBP15.3■□□□□ 0.04
LSM4-203ENST00000593829 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 LCNL1Q6ZST4 164 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 OR4F17Q8NGA8 305 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 SRSF12Q8WXF0 261 aaKnown RBP15.3■□□□□ 0.04
LSM4-203ENST00000593829 TMEM68Q96MH6 324 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 OR5B12Q96R08 314 aa15.3■□□□□ 0.04
LSM4-203ENST00000593829 OR4F4Q96R69 305 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms