RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 STXBP6Q8NFX7 210 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 FAM110DQ8TAY7 271 aaPredicted RBP9.39□□□□□ -0.91
NPC1-214ENST00000593280 C11orf52Q96A22 123 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 ZNF48Q96MX3 618 aaPredicted RBP9.39□□□□□ -0.91
NPC1-214ENST00000593280 SSX3Q99909 188 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 DERL1Q9BUN8 251 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 OR51M1Q9H341 326 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 ZFHX3Q15911 3703 aa9.39□□□□□ -0.91
NPC1-214ENST00000593280 MAP1AP78559 2803 aaPredicted RBP9.39□□□□□ -0.91
NPC1-214ENST00000593280 A0A1W2PRE2 83 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 GNG7O60262 68 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 RD3LP0DJH9 198 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 PYYP10082 97 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 LOXL1Q08397 574 aaPredicted RBP9.38□□□□□ -0.91
NPC1-214ENST00000593280 RNF212Q495C1 297 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 FAM24BQ8N5W8 94 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 PIFOQ8TCI5 191 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 CTDSP1Q9GZU7 261 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 DOPEY2Q9Y3R5 2298 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 MED13LQ71F56 2210 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 USP9YO00507 2555 aaPredicted RBP9.38□□□□□ -0.91
NPC1-214ENST00000593280 SH2D7A6NKC9 451 aaPredicted RBP9.38□□□□□ -0.91
NPC1-214ENST00000593280 GGTLC3B5MD39 225 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 J3QLI3 93 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 OR2J3O76001 311 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 NDUFB8O95169 186 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 TOMM40O96008 361 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 Q56UQ5 140 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 Q5PR19 223 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 FXYD5Q96DB9 178 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 TMEM68Q96MH6 324 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 S4R3C0 116 aa9.38□□□□□ -0.91
NPC1-214ENST00000593280 SPG11Q96JI7 2443 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 LOC105371267A0A1B0GV96 52 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 H3BUX3 64 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 CLDN34H7C241 214 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 AVPP01185 164 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 FOLR2P14207 255 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 MLXQ9UH92 298 aa9.37□□□□□ -0.91
NPC1-214ENST00000593280 SOX21Q9Y651 276 aaPredicted RBP9.37□□□□□ -0.91
NPC1-214ENST00000593280 TGFAP01135 160 aa9.36□□□□□ -0.91
NPC1-214ENST00000593280 CRYBA1P05813 215 aa9.36□□□□□ -0.91
NPC1-214ENST00000593280 RAB5AP20339 215 aa9.36□□□□□ -0.91
NPC1-214ENST00000593280 YPEL3P61236 119 aaPredicted RBP9.36□□□□□ -0.91
NPC1-214ENST00000593280 LINC01551Q86U37 167 aa9.36□□□□□ -0.91
NPC1-214ENST00000593280 MAPK1IP1LQ8NDC0 245 aa9.36□□□□□ -0.91
NPC1-214ENST00000593280 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
NPC1-214ENST00000593280 A6NDX4 124 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 LINC01548A6NM66 108 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 F8W735 103 aaPredicted RBP9.35□□□□□ -0.91
NPC1-214ENST00000593280 IL4P05112 153 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 GP9P14770 177 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 CRYBB3P26998 211 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 RPL35P42766 123 aaKnown RBP9.35□□□□□ -0.91
NPC1-214ENST00000593280 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
NPC1-214ENST00000593280 ELOBQ15370 118 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 LY6EQ16553 131 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 ZNF343Q6P1L6 599 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 Q8WTZ3 238 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 ANAPC16Q96DE5 110 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 RNF125Q96EQ8 232 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 TXN2Q99757 166 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 SLC25A39Q9BZJ4 359 aaPredicted RBP9.35□□□□□ -0.91
NPC1-214ENST00000593280 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
NPC1-214ENST00000593280 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 ANKRD17O75179 2603 aaKnown RBP9.35□□□□□ -0.91
NPC1-214ENST00000593280 CELSR1Q9NYQ6 3014 aa9.35□□□□□ -0.91
NPC1-214ENST00000593280 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 WI2-2373I1.2A0A1W2PRP0 233 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 C9JCJ5 164 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 G3V318 75 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 H7BYZ3 331 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 M0QZK8 103 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 IGHV3-23P01764 117 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 AMY1AP04745 511 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 FCGR2BP31994 310 aaPredicted RBP9.34□□□□□ -0.91
NPC1-214ENST00000593280 RHOGP84095 191 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 FLI1Q01543 452 aaPredicted RBP9.34□□□□□ -0.91
NPC1-214ENST00000593280 C9orf152Q5JTZ5 239 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 ZNF491Q8N8L2 437 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 BLNKQ8WV28 456 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 MBD6Q96DN6 1003 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 ELOVL1Q9BW60 279 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 PITPNC1Q9UKF7 332 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 CR1P17927 2039 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 TRBV9A0A0B4J1U6 114 aa9.34□□□□□ -0.91
NPC1-214ENST00000593280 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms