RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 IGHG4P01861 327 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 GATA2P23769 480 aaPredicted RBP10.46□□□□□ -0.73
VMP1-217ENST00000593168 YPEL3P61236 119 aaPredicted RBP10.46□□□□□ -0.73
VMP1-217ENST00000593168 SLC35B1P78383 322 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 ZNF726P1Q15940 193 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 TMEM95Q3KNT9 176 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 Q56UQ5 140 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 SLC7A5P1Q8MH63 180 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 EEF1AKMT3Q96AZ1 226 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 HRH4Q9H3N8 390 aa10.46□□□□□ -0.73
VMP1-217ENST00000593168 A0A0G2JLM5 398 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 PSMB11A5LHX3 300 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 TOMM40O96008 361 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 PF4V1P10720 104 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 RAB9AP51151 201 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 TPPP2P59282 170 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 PLP1P60201 277 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 RHOBP62745 196 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 TIGITQ495A1 244 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 GCSAMLQ5JQS6 135 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 FAM122CQ6P4D5 195 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 SPSB3Q6PJ21 355 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 IL34Q6ZMJ4 242 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 COMMD1Q8N668 190 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 OR1L4Q8NGR5 311 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 GATAD1Q8WUU5 269 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 SFT2D1Q8WV19 159 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 RAB24Q969Q5 203 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 MARC2Q969Z3 335 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 RNF2Q99496 336 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 SERTAD4Q9NUC0 356 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 S4R3C0 116 aa10.45□□□□□ -0.74
VMP1-217ENST00000593168 VWFP04275 2813 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 ELANEP08246 267 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 CTSGP08311 255 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 RD3LP0DJH9 198 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 PSG1P11464 419 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 PSMB8P28062 276 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
VMP1-217ENST00000593168 FOXL1Q12952 345 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 TEX38Q6PEX7 206 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 Q6ZSV7 163 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 COMMD7Q86VX2 200 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 PFDN5Q99471 154 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 KLK15Q9H2R5 256 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 DNAJC4Q9NNZ3 241 aa10.44□□□□□ -0.74
VMP1-217ENST00000593168 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
VMP1-217ENST00000593168 RAB19A4D1S5 217 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 MAP1LC3B2A6NCE7 125 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 IGHV3-23P01764 117 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 CLEC3BP05452 202 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 CRYBA1P05813 215 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 OR5G3P0C626 314 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 DEFA5Q01523 94 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 FOXE3Q13461 319 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 PMS2P11Q13670 270 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 FAM78BQ5VT40 261 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 LCN15Q6UWW0 184 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 SSX7Q7RTT5 188 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
VMP1-217ENST00000593168 OR51G1Q8NGK1 321 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 Q8WTZ3 238 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 TMEM37Q8WXS4 190 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 CCDC140Q96MF4 163 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 MRPL32Q9BYC8 188 aaKnown RBP10.43□□□□□ -0.74
VMP1-217ENST00000593168 MAP1LC3BQ9GZQ8 125 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 SLC25A22Q9H936 323 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 FUT9Q9Y231 359 aa10.43□□□□□ -0.74
VMP1-217ENST00000593168 OR2T8A6NH00 312 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 NUPL2O15504 423 aaKnown RBP10.42□□□□□ -0.74
VMP1-217ENST00000593168 COX7A2P2O60397 106 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 HYPMO75409 117 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 OR2C1O95371 312 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 FAM209BQ5JX69 171 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 PATE2Q6UY27 113 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 RNF152Q8N8N0 203 aa10.42□□□□□ -0.74
VMP1-217ENST00000593168 SEPSECSQ9HD40 501 aaKnown RBP10.42□□□□□ -0.74
VMP1-217ENST00000593168 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
VMP1-217ENST00000593168 WI2-2373I1.2A0A1W2PRP0 233 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 TGOLN2O43493 480 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 ORM2P19652 201 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 GPR183P32249 361 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 ADMP35318 185 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 CCL20P78556 96 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
VMP1-217ENST00000593168 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 ZNF343Q6P1L6 599 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 ZNF600Q6ZNG1 722 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 ZNF491Q8N8L2 437 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 CHRDL1Q9BU40 450 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 C16orf95Q9H693 158 aa10.41□□□□□ -0.74
VMP1-217ENST00000593168 A0A1B0GV50 99 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 CXorf1O96002 111 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 TAS2R45P59539 299 aa10.4□□□□□ -0.74
VMP1-217ENST00000593168 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms