RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 WDR83OSQ9Y284 106 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 LSM4Q9Y4Z0 139 aaKnown RBP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 PUS1Q9Y606 427 aaKnown RBP eCLIP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 IGHV3-66A0A0C4DH42 116 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 PFDN1O60925 122 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 GGCTO75223 188 aaKnown RBP7.34□□□□□ -1.23
DDX39A-220ENST00000593008 YIF1AO95070 293 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 APOHP02749 345 aaPredicted RBP7.34□□□□□ -1.23
DDX39A-220ENST00000593008 PSG1P11464 419 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 ZP3P21754 424 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 NPBWR1P48145 328 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 USF2Q15853 346 aaPredicted RBP7.34□□□□□ -1.23
DDX39A-220ENST00000593008 RPEL1Q2QD12 228 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 TM4SF20Q53R12 229 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 BTNL8Q6UX41 500 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 TOMM20LQ6UXN7 152 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 ADAMTSL5Q6ZMM2 481 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 STPG3Q8N7X2 389 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 HSD17B11Q8NBQ5 300 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 INO80EQ8NBZ0 244 aaPredicted RBP7.34□□□□□ -1.23
DDX39A-220ENST00000593008 MRAPQ8TCY5 172 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 TMEM190Q8WZ59 177 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 C20orf24Q9BUV8 137 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 GGTLC1Q9BX51 225 aa7.34□□□□□ -1.23
DDX39A-220ENST00000593008 ZNF320A2RRD8 509 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 TMEM213A2RRL7 107 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 HMSDA8MTL9 139 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 AGPAT2O15120 278 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 NUPL2O15504 423 aaKnown RBP7.33□□□□□ -1.24
DDX39A-220ENST00000593008 S100A11P31949 105 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 HBG1P69891 147 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 HBG2P69892 147 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 KLF5Q13887 457 aaPredicted RBP7.33□□□□□ -1.24
DDX39A-220ENST00000593008 IL34Q6ZMJ4 242 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 CYP2G1PQ6ZSU1 146 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 TMUB2Q71RG4 321 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 TMEM144Q7Z5S9 345 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 KCNRGQ8N5I3 272 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 BPIFCQ8NFQ6 507 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 OR51G1Q8NGK1 321 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 TXN2Q99757 166 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 PBDC1Q9BVG4 233 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 NPCDR1Q9BY65 106 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 WDR61Q9GZS3 305 aaKnown RBP7.33□□□□□ -1.24
DDX39A-220ENST00000593008 SLC45A2Q9UMX9 530 aa7.33□□□□□ -1.24
DDX39A-220ENST00000593008 WI2-2373I1.2A0A1W2PRP0 233 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 SEC14L6B5MCN3 397 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 BCL2L11O43521 198 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 TOMM40O96008 361 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 IL4P05112 153 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 LINC00869P0C866 280 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 S100A7P31151 101 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
DDX39A-220ENST00000593008 CAMLGP49069 296 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 ELLP55199 621 aaPredicted RBP7.32□□□□□ -1.24
DDX39A-220ENST00000593008 LYZP61626 148 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 OPCMLQ14982 345 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 SPATA31B1PQ5VZV4 182 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 TEPPQ6URK8 271 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 ZNF600Q6ZNG1 722 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 REC114Q7Z4M0 266 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 TRGV9Q99603 122 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 GGACTQ9BVM4 153 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 ARL6Q9H0F7 186 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 VSIRQ9H7M9 311 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 NPVFQ9HCQ7 196 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 PLA2G2EQ9NZK7 142 aa7.32□□□□□ -1.24
DDX39A-220ENST00000593008 TRAV30A0A087WSZ9 112 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 FNDC10F2Z333 226 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 K7EIL1 84 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 RD3LP0DJH9 198 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 ATP6V0CP27449 155 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 EGFEM1PQ0D2K5 195 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 ZNF345Q14585 488 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 ATP6V1FQ16864 119 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 FAM106AQ4KMX7 169 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 MORN5Q5VZ52 161 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 LEMD1Q68G75 181 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 SPSB3Q6PJ21 355 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 RNF125Q96EQ8 232 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 UHRF2Q96PU4 802 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 ARPC5LQ9BPX5 153 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 ELOVL1Q9BW60 279 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 PXMP4Q9Y6I8 212 aa7.31□□□□□ -1.24
DDX39A-220ENST00000593008 C2orf70A6NJV1 201 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 NDUFA4O00483 81 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 OVOL1O14753 267 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 DFFBO76075 338 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 FABP1P07148 127 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 CSN3P07498 182 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 SNRPCP09234 159 aaKnown RBP7.3□□□□□ -1.24
DDX39A-220ENST00000593008 ORM2P19652 201 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 INSL3P51460 131 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 RAB2AP61019 212 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 YPEL3P61236 119 aaPredicted RBP7.3□□□□□ -1.24
DDX39A-220ENST00000593008 PRR20EP86478 221 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 PRR20CP86479 221 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 PRR20DP86480 221 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 PRR20BP86481 221 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms