RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PRB3Q04118 309 aaPredicted RBP11□□□□□ -0.65
SMARCA4-216ENST00000591545 SRSF1Q07955 248 aaKnown RBP eCLIP11□□□□□ -0.65
SMARCA4-216ENST00000591545 ZNF474Q6S9Z5 364 aaPredicted RBP11□□□□□ -0.65
SMARCA4-216ENST00000591545 RASL11AQ6T310 242 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
SMARCA4-216ENST00000591545 SMPXQ9UHP9 88 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 FRMPD3Q5JV73 1810 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 PSMB11A5LHX3 300 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 RNF125Q96EQ8 232 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 IGHV3-66A0A0C4DH42 116 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 SRSF3P84103 164 aaKnown RBP11□□□□□ -0.65
SMARCA4-216ENST00000591545 TCF15Q12870 199 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 GTSCR1Q86UQ5 136 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 BEND2Q8NDZ0 799 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 CNTFRP26992 372 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 VMO1Q7Z5L0 202 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 DTX1Q86Y01 620 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 C3orf56Q8N813 242 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 GFI1Q99684 422 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 TTC28Q96AY4 2481 aa11□□□□□ -0.65
SMARCA4-216ENST00000591545 H3BUT2 72 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 CD24P25063 80 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 DUX3Q96PT4 197 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 DERL1Q9BUN8 251 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 LY6G6EA0A0G2JKS1 128 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 F2Z2F3 143 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 CA1P00915 261 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 CLPSP04118 112 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 OR9G9P0C7N8 305 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 DUTP33316 252 aaKnown RBP10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 FOXL1Q12952 345 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 EFNB3Q15768 340 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 OR5AN1Q8NGI8 311 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 HIST1H2BLQ99880 126 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 U3KQA8 63 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 DUSP14O95147 198 aaKnown RBP10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 APOMO95445 188 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 NAPSAO96009 420 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 Q5PR19 223 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 STHQ8IWL8 128 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 WFDC1Q9HC57 220 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 PSG8Q9UQ74 426 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 TRAV21A0A0B4J279 112 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 PRR32B1ATL7 298 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 GATA2P23769 480 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 B3GALT5-AS1P59052 145 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 RHOGP84095 191 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 NABP1Q96AH0 204 aa10.99□□□□□ -0.65
SMARCA4-216ENST00000591545 IFI27P40305 119 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 CMC4P56277 68 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 HSD52Q0P140 79 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 LDLRAD2Q5SZI1 272 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 HIST3H2BBQ8N257 126 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 CYSLTR1Q9Y271 337 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 M0R1W7 72 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 SNAI2O43623 268 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 FBLN7Q53RD9 439 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 RPUSD1Q9UJJ7 312 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 CACNA1DQ01668 2161 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 HEATR5BQ9P2D3 2071 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 A0A0A6YYD4 124 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 IGKV3OR2-268A0A0C4DH90 116 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 A6NNC1 897 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 COLCA2A8K830 154 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 TNFSF13O75888 250 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 NDUFA3O95167 84 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 LY96Q9Y6Y9 160 aa10.98□□□□□ -0.65
SMARCA4-216ENST00000591545 IGHV2-26A0A0B4J1V2 119 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 GATA3P23771 443 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 DMRTA2Q96SC8 542 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 LINC01587Q99440 93 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 BPESC1Q9GZL8 116 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 HTN3P15516 51 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 LDLRAD4O15165 306 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 MRPL52Q86TS9 123 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 H3BUX3 64 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 RNASE4P34096 147 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 GNG5P63218 68 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 COQ2Q96H96 371 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
SMARCA4-216ENST00000591545 IGHV1-8P0DP01 117 aa10.96□□□□□ -0.65
SMARCA4-216ENST00000591545 TMEM155Q4W5P6 130 aa10.96□□□□□ -0.65
SMARCA4-216ENST00000591545 SLC25A48Q6ZT89 311 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-216ENST00000591545 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.65
SMARCA4-216ENST00000591545 NUDT10Q8NFP7 164 aa10.96□□□□□ -0.65
SMARCA4-216ENST00000591545 RNF114Q9Y508 228 aa10.96□□□□□ -0.65
SMARCA4-216ENST00000591545 ZNF585BQ52M93 769 aa10.96□□□□□ -0.66
SMARCA4-216ENST00000591545 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.66
SMARCA4-216ENST00000591545 AGMATQ9BSE5 352 aa10.96□□□□□ -0.66
SMARCA4-216ENST00000591545 RAMP3O60896 148 aa10.96□□□□□ -0.66
SMARCA4-216ENST00000591545 NHP2Q9NX24 153 aaKnown RBP10.96□□□□□ -0.66
SMARCA4-216ENST00000591545 ZNF319Q9P2F9 582 aa10.95□□□□□ -0.66
SMARCA4-216ENST00000591545 IGKCP01834 107 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms