RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 EPPK1P58107 5090 aaKnown RBP7.1□□□□□ -1.27
BRCA1-226ENST00000591534 TNCP24821 2201 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 DNAH1Q9P2D7 4330 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 LOC102724200A0A096LPH7 203 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 NPIPB5A8MRT5 1133 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 FNDC10F2Z333 226 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 CCSO14618 274 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 ARPC5O15511 151 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 OR2J3O76001 311 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 OR2C1O95371 312 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 SIX6O95475 246 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 IGKV1-5P01602 117 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 MBPP02686 304 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 PRH1P02810 166 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 CD7P09564 240 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 P0C879 139 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 DEFA4P12838 97 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 CBLN1P23435 193 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RPL12P30050 165 aaKnown RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 S100A7P31151 101 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 ARL3P36405 182 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 HOXA1P49639 335 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 CAV2P51636 162 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 BRWD1-AS2P59051 145 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 PRCDQ00LT1 54 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RAB31Q13636 194 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RAB32Q13637 225 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 OR2B11Q5JQS5 317 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 S100A7AQ86SG5 101 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 LHFPL5Q8TAF8 219 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 DTD1Q8TEA8 209 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 PHYHIPLQ96FC7 376 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 CXorf58Q96LI9 332 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 QTRT1Q9BXR0 403 aaKnown RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 HEYLQ9NQ87 328 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-226ENST00000591534 MBD2Q9UBB5 411 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 TNFSF18Q9UNG2 199 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 HSPB11Q9Y547 144 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 OR51B2Q9Y5P1 312 aa7.09□□□□□ -1.27
BRCA1-226ENST00000591534 TRBV7-1A0A0A6YYK4 115 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 RPS10-NUDT3A0A1W2PQS6 291 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 CXorf65A6NEN9 183 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 NUPR2A6NF83 97 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 HMGB3O15347 200 aaKnown RBP7.08□□□□□ -1.28
BRCA1-226ENST00000591534 SSSCA1O60232 199 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 MPDU1O75352 247 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 IFNA5P01569 189 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 RPL27AP46776 148 aaKnown RBP7.08□□□□□ -1.28
BRCA1-226ENST00000591534 SULT1A1P50225 295 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 APOC4P55056 127 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 KCNRGQ8N5I3 272 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 TMEM217Q8N7C4 229 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 OR10P1Q8NGE3 313 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 OR1S2Q8NGQ3 325 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 GNPNAT1Q96EK6 184 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-226ENST00000591534 ARL6Q9H0F7 186 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 PSENENQ9NZ42 101 aa7.08□□□□□ -1.28
BRCA1-226ENST00000591534 KLK5Q9Y337 293 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-226ENST00000591534 PPP5D1E7EU14 171 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 LY6G6CO95867 125 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 IFNA10P01566 189 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 FABP1P07148 127 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 IL6RP08887 468 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-226ENST00000591534 TPT1P13693 172 aaKnown RBP7.07□□□□□ -1.28
BRCA1-226ENST00000591534 MYOD1P15172 320 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 PTTG1IPP53801 180 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 OR2B8PP59922 312 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 RAB14P61106 215 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 C10orf55Q5SWW7 151 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 SLC25A24Q6NUK1 477 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 ZNF767PQ75MW2 155 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 SSX9Q7RTT3 188 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 VKORC1L1Q8N0U8 176 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 SCGB1C1Q8TD33 95 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 RNASEH2CQ8TDP1 164 aaKnown RBP7.07□□□□□ -1.28
BRCA1-226ENST00000591534 CACNG8Q8WXS5 425 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 RNF24Q9Y225 148 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 UFC1Q9Y3C8 167 aa7.07□□□□□ -1.28
BRCA1-226ENST00000591534 A8MWP6 167 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 B5MCH6 92 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 TEX46H3BTG2 121 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 UBE2CO00762 179 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 BCL2L11O43521 198 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 CRYGCP07315 174 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 BMI1P35226 326 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 RAB5CP51148 216 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 ELLP55199 621 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms