RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 PRR20AP86496 221 aa12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 CSNK1G2-AS1Q8NCQ2 148 aa12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 MCUBQ9NWR8 336 aa12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 PRR13Q9NZ81 148 aa12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 RSL24D1Q9UHA3 163 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 PFDN2Q9UHV9 154 aa12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 HECTD4Q9Y4D8 3996 aa12.99□□□□□ -0.33
PRKCSH-211ENST00000590098 ELOA3CA0A087WX78 387 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 BUB3O43684 328 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 PSG1P11464 419 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 AKR1C4P17516 323 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 NUP62P37198 522 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 KLF9Q13886 244 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 SMCO1Q147U7 214 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 Q6ZTC4 211 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 LGI3Q8N145 548 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 DTD1Q8TEA8 209 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 RAB2BQ8WUD1 216 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 HSPB7Q9UBY9 170 aa12.98□□□□□ -0.33
PRKCSH-211ENST00000590098 A0A0B4J2A0 478 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 ANXA3P12429 323 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 LYZL2Q7Z4W2 148 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 RBKSQ9H477 322 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 SHPKQ9UHJ6 478 aa12.97□□□□□ -0.33
PRKCSH-211ENST00000590098 ZFP92A6NM28 416 aa12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 H3BMM0 161 aa12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 ATP5IP56385 69 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 SRPXP78539 464 aa12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 OR1S1Q8NH92 325 aa12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 XCL2Q9UBD3 114 aa12.96□□□□□ -0.33
PRKCSH-211ENST00000590098 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
PRKCSH-211ENST00000590098 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
PRKCSH-211ENST00000590098 GPX4P36969 197 aaPredicted RBP12.95□□□□□ -0.34
PRKCSH-211ENST00000590098 TMBIM6P55061 237 aa12.95□□□□□ -0.34
PRKCSH-211ENST00000590098 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
PRKCSH-211ENST00000590098 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
PRKCSH-211ENST00000590098 FABP12A6NFH5 140 aa12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 FABP1P07148 127 aa12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 NKX2-1P43699 371 aaPredicted RBP12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 SUPT4H1P63272 117 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 OR8G2PQ6IF36 304 aa12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 RNF126Q9BV68 326 aa12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
PRKCSH-211ENST00000590098 DEFB131BA0A096LNP1 70 aa12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 ID1P41134 155 aa12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 GAMTQ14353 236 aa12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 C12orf74Q32Q52 190 aa12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 LINC00052Q96N35 136 aa12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 CELA1Q9UNI1 258 aa12.93□□□□□ -0.34
PRKCSH-211ENST00000590098 TNFSF8P32971 234 aa12.92□□□□□ -0.34
PRKCSH-211ENST00000590098 FAUP35544 74 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-211ENST00000590098 ZNF90Q03938 601 aa12.92□□□□□ -0.34
PRKCSH-211ENST00000590098 ZNF767PQ75MW2 155 aa12.92□□□□□ -0.34
PRKCSH-211ENST00000590098 HERC2O95714 4834 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 SNRPGP15A8MWD9 76 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 LYZP61626 148 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 RAB11AP62491 216 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 C1orf194Q5T5A4 169 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 COQ8AQ8NI60 647 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 SLIRPQ9GZT3 109 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-211ENST00000590098 IGKV1D-37A0A075B6S9 117 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 PSMB3P49720 205 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 GDF5OSQ5U4N7 250 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 MCFD2Q8NI22 146 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 NEU1Q99519 415 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 SOSTQ9BQB4 213 aa12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 WDR12Q9GZL7 423 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 PAIP2BQ9ULR5 123 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-211ENST00000590098 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 AMBPP02760 352 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 AP3S2P59780 193 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 OR2F1Q13607 317 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 OR8I2Q8N0Y5 310 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 NDUFAF3Q9BU61 184 aa12.89□□□□□ -0.35
PRKCSH-211ENST00000590098 IGHV3OR16-12A0A075B7B8 117 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 PITX3O75364 302 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 MED6O75586 246 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 IAPPP10997 89 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 VAMP1P23763 118 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 EMP1P54849 157 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 FXYD7P58549 80 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 DEFB1P60022 68 aa12.88□□□□□ -0.35
PRKCSH-211ENST00000590098 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms