RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 LYRM2Q9NU23 88 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-212ENST00000590096 LSM4Q9Y4Z0 139 aaKnown RBP16.04■□□□□ 0.16
ATG4D-212ENST00000590096 SMAD5-AS1Q9Y6J3 95 aa16.04■□□□□ 0.16
ATG4D-212ENST00000590096 FAM24AA6NFZ4 105 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 FNDC10F2Z333 226 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 CRYBB3P26998 211 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 TMEM144Q7Z5S9 345 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 STX12Q86Y82 276 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 ST8SIA2Q92186 375 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 MED28Q9H204 178 aa16.03■□□□□ 0.16
ATG4D-212ENST00000590096 IGKV1OR2-108A0A075B7D4 117 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 TSPAN4O14817 238 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 APOHP02749 345 aaPredicted RBP16.02■□□□□ 0.16
ATG4D-212ENST00000590096 CD5P06127 495 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 HNRNPCP07910 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
ATG4D-212ENST00000590096 CD81P60033 236 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 OXA1LQ15070 435 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 PPP1R1CQ8WVI7 109 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 RNF125Q96EQ8 232 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 GRAMD2BQ96HH9 432 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 PBDC1Q9BVG4 233 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 GGACTQ9BVM4 153 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 VSIRQ9H7M9 311 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 NPVFQ9HCQ7 196 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 RABAC1Q9UI14 185 aa16.02■□□□□ 0.16
ATG4D-212ENST00000590096 IGHV3-66A0A0C4DH42 116 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 E5RGE8 158 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 CST7O76096 145 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 PET100P0DJ07 73 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 SULT1A1P50225 295 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 SLC38A11Q08AI6 406 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 ARL16Q0P5N6 197 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 OR2F1Q13607 317 aa16.01■□□□□ 0.15
ATG4D-212ENST00000590096 USF2Q15853 346 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-212ENST00000590096 SPAG8Q99932 426 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-212ENST00000590096 CFDP00746 253 aaPredicted RBP16■□□□□ 0.15
ATG4D-212ENST00000590096 LYZP61626 148 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 TCF24Q7RTU0 167 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 Q8N1Y9 231 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 LILRB2Q8N423 598 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 TMEM252Q8N6L7 170 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 TMEM217Q8N7C4 229 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 BPIFCQ8NFQ6 507 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 NEURL2Q9BR09 285 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 PFDN2Q9UHV9 154 aa16■□□□□ 0.15
ATG4D-212ENST00000590096 IGSF23A1L1A6 192 aa15.99■□□□□ 0.15
ATG4D-212ENST00000590096 HBG1P69891 147 aa15.99■□□□□ 0.15
ATG4D-212ENST00000590096 HBG2P69892 147 aa15.99■□□□□ 0.15
ATG4D-212ENST00000590096 TEPPQ6URK8 271 aa15.99■□□□□ 0.15
ATG4D-212ENST00000590096 SLC25A31Q9H0C2 315 aa15.99■□□□□ 0.15
ATG4D-212ENST00000590096 OR5AC2Q9NZP5 309 aa15.99■□□□□ 0.15
ATG4D-212ENST00000590096 OR4C46A6NHA9 309 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 DFFBO76075 338 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 MPC2O95563 127 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 CD7P09564 240 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 CXCL3P19876 107 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 S100A11P31949 105 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 NUP62P37198 522 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-212ENST00000590096 P2RY1P47900 373 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 EIF2B2P49770 351 aaKnown RBP15.98■□□□□ 0.15
ATG4D-212ENST00000590096 RPL11P62913 178 aaKnown RBP15.98■□□□□ 0.15
ATG4D-212ENST00000590096 FCN2Q15485 313 aa15.98■□□□□ 0.15
ATG4D-212ENST00000590096 IGKV3-7A0A075B6H7 116 aa15.97■□□□□ 0.15
ATG4D-212ENST00000590096 H0YIZ8 118 aa15.97■□□□□ 0.15
ATG4D-212ENST00000590096 PAFAH1B2P68402 229 aa15.97■□□□□ 0.15
ATG4D-212ENST00000590096 CYP2G1PQ6ZSU1 146 aa15.97■□□□□ 0.15
ATG4D-212ENST00000590096 U3KQE9 123 aa15.97■□□□□ 0.15
ATG4D-212ENST00000590096 IGHV4-30-4P0DP06 118 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 SELENOTP62341 195 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 FAM90A2PQ658T7 463 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 OR11H7Q8NGC8 314 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 PPP1R14BQ96C90 147 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 TUBA4BQ9H853 241 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 UQCC1Q9NVA1 299 aa15.96■□□□□ 0.15
ATG4D-212ENST00000590096 DNASE2O00115 360 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-212ENST00000590096 GATA2P23769 480 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-212ENST00000590096 TFPI2P48307 235 aa15.95■□□□□ 0.14
ATG4D-212ENST00000590096 ATP6V1FQ16864 119 aa15.95■□□□□ 0.14
ATG4D-212ENST00000590096 B9D2Q9BPU9 175 aa15.95■□□□□ 0.14
ATG4D-212ENST00000590096 TMEM147Q9BVK8 224 aa15.95■□□□□ 0.14
ATG4D-212ENST00000590096 HELTA6NFD8 242 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 OR11H12B2RN74 326 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 S100A7P31151 101 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 EWSR1Q01844 656 aaKnown RBP eCLIP15.94■□□□□ 0.14
ATG4D-212ENST00000590096 BAXQ07812 192 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 RAB31Q13636 194 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 C16orf54Q6UWD8 224 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 TMEM182Q6ZP80 229 aaPredicted RBP15.94■□□□□ 0.14
ATG4D-212ENST00000590096 GBGT1Q8N5D6 347 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 MBD2Q9UBB5 411 aa15.94■□□□□ 0.14
ATG4D-212ENST00000590096 BUB3O43684 328 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 ORM2P19652 201 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 ZNF546Q86UE3 836 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 OR1B1Q8NGR6 318 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 THAP6Q8TBB0 222 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 GLMPQ8WWB7 406 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 RNF126Q9BV68 326 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 MS4A6AQ9H2W1 248 aa15.93■□□□□ 0.14
ATG4D-212ENST00000590096 UBE2L5PA0A1B0GUS4 154 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 A8MZ25 164 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms