RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 NMSQ5H8A3 153 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 NPIPB3Q92617 1050 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 X6R8D5 127 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 VPS13DQ5THJ4 4388 aa13.07□□□□□ -0.32
H3F3B-209ENST00000589949 IGHV4-28A0A0C4DH34 117 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 RPS10-NUDT3A0A1W2PQS6 291 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 YPEL3P61236 119 aaPredicted RBP13.06□□□□□ -0.32
H3F3B-209ENST00000589949 SUPT4H1P63272 117 aaKnown RBP13.06□□□□□ -0.32
H3F3B-209ENST00000589949 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 CSNK1G2-AS1Q8NCQ2 148 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 OR1S2Q8NGQ3 325 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 RNASEH2CQ8TDP1 164 aaKnown RBP13.06□□□□□ -0.32
H3F3B-209ENST00000589949 MCUBQ9NWR8 336 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
H3F3B-209ENST00000589949 HNRNPCP07910 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
H3F3B-209ENST00000589949 SLC25A4P12235 298 aa13.05□□□□□ -0.32
H3F3B-209ENST00000589949 Q8WTZ3 238 aa13.05□□□□□ -0.32
H3F3B-209ENST00000589949 RAB40CQ96S21 281 aa13.05□□□□□ -0.32
H3F3B-209ENST00000589949 MFFQ9GZY8 342 aa13.05□□□□□ -0.32
H3F3B-209ENST00000589949 DNAH10Q8IVF4 4471 aa13.05□□□□□ -0.32
H3F3B-209ENST00000589949 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
H3F3B-209ENST00000589949 TCRBP04435 133 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 IL4P05112 153 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 NPY1RP25929 384 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 DHRS2Q13268 280 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 LYZL2Q7Z4W2 148 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 PRRT1Q99946 306 aa13.04□□□□□ -0.32
H3F3B-209ENST00000589949 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 ZNF705EA8MWA4 302 aaPredicted RBP13.03□□□□□ -0.32
H3F3B-209ENST00000589949 IFNA4P05014 189 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 SULT1A3P0DMM9 295 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 SULT1A4P0DMN0 295 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 SPP1P10451 314 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 CCR6P51684 374 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 PSMG4Q5JS54 123 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 IL22RA2Q969J5 263 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 RBKSQ9H477 322 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 SCP2D1Q9UJQ7 156 aa13.03□□□□□ -0.32
H3F3B-209ENST00000589949 FAM90A26D6RGX4 464 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 BUB3O43684 328 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 TOMM40O96008 361 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 PSG1P11464 419 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 MORN3Q6PF18 240 aaPredicted RBP13.02□□□□□ -0.33
H3F3B-209ENST00000589949 GSG1LQ6UXU4 331 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 NARS2Q96I59 477 aaKnown RBP13.02□□□□□ -0.33
H3F3B-209ENST00000589949 MARVELD1Q9BSK0 173 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 HSPB7Q9UBY9 170 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 APLNQ9ULZ1 77 aa13.02□□□□□ -0.33
H3F3B-209ENST00000589949 IGKV1D-37A0A075B6S9 117 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 HELTA6NFD8 242 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 SCGB2A1O75556 95 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 NDUFB6O95139 128 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 RD3LP0DJH9 198 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 AKR1C4P17516 323 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 DEFB1P60022 68 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 OR51G1Q8NGK1 321 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 SLC25A21Q9BQT8 299 aaPredicted RBP13.01□□□□□ -0.33
H3F3B-209ENST00000589949 HRH4Q9H3N8 390 aa13.01□□□□□ -0.33
H3F3B-209ENST00000589949 A0A0B4J2A0 478 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 IGLL5B9A064 214 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 INMT-MINDY4F8WBC2 141 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 IFNA10P01566 189 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 MIFP14174 115 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 SMCO1Q147U7 214 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 Q6ZTC4 211 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 DTD1Q8TEA8 209 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 SHPKQ9UHJ6 478 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 CELA1Q9UNI1 258 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 KCNIP3Q9Y2W7 256 aa13□□□□□ -0.33
H3F3B-209ENST00000589949 H2AFB2P0C5Z0 115 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 ZNF90Q03938 601 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 TMEM41BQ5BJD5 291 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 ETFRF1Q6IPR1 90 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 NRN1Q9NPD7 142 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 NUDT15Q9NV35 164 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 U3KQ87 197 aa12.99□□□□□ -0.33
H3F3B-209ENST00000589949 TRAV6A0A075B6T7 132 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 H3BMM0 161 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
H3F3B-209ENST00000589949 AP2S1P53680 142 aaPredicted RBP12.98□□□□□ -0.33
H3F3B-209ENST00000589949 GAMTQ14353 236 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 GDF5OSQ5U4N7 250 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 SIGLEC15Q6ZMC9 328 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 ZNF767PQ75MW2 155 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 LGI3Q8N145 548 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 C20orf85Q9H1P6 137 aa12.98□□□□□ -0.33
H3F3B-209ENST00000589949 hCG_2014768A0A024R1R8 64 aa12.97□□□□□ -0.33
H3F3B-209ENST00000589949 PITX3O75364 302 aa12.97□□□□□ -0.33
H3F3B-209ENST00000589949 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
H3F3B-209ENST00000589949 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
H3F3B-209ENST00000589949 SCRT1Q9BWW7 348 aa12.97□□□□□ -0.33
H3F3B-209ENST00000589949 XCL2Q9UBD3 114 aa12.97□□□□□ -0.33
H3F3B-209ENST00000589949 C12orf74Q32Q52 190 aa12.96□□□□□ -0.33
H3F3B-209ENST00000589949 NOXA1Q86UR1 476 aa12.96□□□□□ -0.33
H3F3B-209ENST00000589949 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
H3F3B-209ENST00000589949 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms