RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OR2W1Q9Y3N9 320 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 TNCP24821 2201 aa5.96□□□□□ -1.46
SMAD4-209ENST00000589941 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM250H0YL14 139 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 M0R1W7 72 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 CST7O76096 145 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 IFNA5P01569 189 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 IGKV1-39P01597 117 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 IGKV1D-39P04432 117 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 TRGC1P0CF51 173 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 S100GP29377 79 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 NDUFA6P56556 154 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 PKIAP61925 76 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 PRDX4Q13162 271 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF674Q2M3X9 581 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM41BQ5BJD5 291 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM14EPQ6UXP3 125 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 ZDHHC23Q8IYP9 409 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF383Q8NA42 475 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 OR56B2PQ8NGI1 322 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 PIGCQ92535 297 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 FRZBQ92765 325 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 SLAMF9Q96A28 289 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 C14orf144Q96I85 54 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 ACTR3CQ9C0K3 210 aaPredicted RBP5.95□□□□□ -1.46
SMAD4-209ENST00000589941 CCL28Q9NRJ3 127 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 MTCH1Q9NZJ7 389 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 OR14J1Q9UGF5 321 aa5.95□□□□□ -1.46
SMAD4-209ENST00000589941 TRAV24A0A0B4J272 114 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 OR5B21A6NL26 309 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 SYNGR2O43760 224 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 IFNA1P01562 189 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 IGKV1-5P01602 117 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 TRGC2P03986 189 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 ARL16Q0P5N6 197 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 EIF4EBP1Q13541 118 aaPredicted RBP5.94□□□□□ -1.46
SMAD4-209ENST00000589941 JOSD1Q15040 202 aaPredicted RBP5.94□□□□□ -1.46
SMAD4-209ENST00000589941 VWC2Q2TAL6 325 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF585BQ52M93 769 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 Q6P435 159 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 C9orf47Q6ZRZ4 202 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 WDR86Q86TI4 376 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM183AQ8IXX5 376 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 OR10D4PQ8NGN7 298 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 OR5P3Q8WZ94 311 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 APOBEC3DQ96AK3 386 aaPredicted RBP5.94□□□□□ -1.46
SMAD4-209ENST00000589941 PFDN5Q99471 154 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 NABP2Q9BQ15 211 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 C2orf88Q9BSF0 95 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 WDR61Q9GZS3 305 aaKnown RBP5.94□□□□□ -1.46
SMAD4-209ENST00000589941 MAGT1Q9H0U3 335 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 NAT8Q9UHE5 227 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 MPC1Q9Y5U8 109 aa5.94□□□□□ -1.46
SMAD4-209ENST00000589941 CCL24O00175 119 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 CYB5BO43169 146 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 GGCTO75223 188 aaKnown RBP5.93□□□□□ -1.46
SMAD4-209ENST00000589941 KBTBD11O94819 623 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 CA6P23280 308 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 CD24P25063 80 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 ERVK11-1P61568 191 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 HBG1P69891 147 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 HBG2P69892 147 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 SSX2Q16385 188 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 ATP6V1FQ16864 119 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 AARDQ4LEZ3 155 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 C9orf152Q5JTZ5 239 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 SPIN3Q5JUX0 258 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 SSX7Q7RTT5 188 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 OR10A7Q8NGE5 316 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 OR10V1Q8NGI7 309 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 OR4X1Q8NH49 305 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 ACY3Q96HD9 319 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 URB1-AS1Q96HZ7 61 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 NOL4LQ96MY1 436 aaPredicted RBP5.93□□□□□ -1.46
SMAD4-209ENST00000589941 GAFA1Q96PS6 74 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 GNG13Q9P2W3 67 aa5.93□□□□□ -1.46
SMAD4-209ENST00000589941 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 A0A1B0GV50 99 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 PSMB11A5LHX3 300 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 MAP1LC3B2A6NCE7 125 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 CD300LBA8K4G0 201 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 PMS2P5A8MQ11 134 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 ODF3BA8MYP8 253 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 J3QT63 122 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 NDUFB3O43676 98 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 SOX15O60248 233 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 SERPINE2P07093 398 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 PSG2P11465 335 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 TUBG1P23258 451 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 CNTFRP26992 372 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 DDTP30046 118 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 RAB11AP62491 216 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 GAMTQ14353 236 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 GFI1BQ5VTD9 330 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 STUMQ69YW2 141 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF497Q6ZNH5 498 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF573Q86YE8 665 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms