RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DNHD1Q96M86 4753 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 TRAV20A0A0B4J274 112 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 IGHV4-61A0A0C4DH41 118 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 MDFIC2A0A1B0GVS7 189 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 B4DSR2 109 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 K7EIM0 57 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 TOMM40O96008 361 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 PFN1P07737 140 aaKnown RBP8.22□□□□□ -1.09
VPS25-203ENST00000589520 ORM2P19652 201 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
VPS25-203ENST00000589520 RPL19P84098 196 aaKnown RBP8.22□□□□□ -1.09
VPS25-203ENST00000589520 FOXL1Q12952 345 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 CRYBG3Q68DQ2 2970 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 C16orf82Q7Z2V1 217 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 OR1B1Q8NGR6 318 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 SGMS2Q8NHU3 365 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 Q8WTZ3 238 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 AJUBAQ96IF1 538 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
VPS25-203ENST00000589520 ATP6V0BQ99437 205 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 MRPL36Q9P0J6 103 aaKnown RBP8.22□□□□□ -1.09
VPS25-203ENST00000589520 DMRT1Q9Y5R6 373 aa8.22□□□□□ -1.09
VPS25-203ENST00000589520 CELSR1Q9NYQ6 3014 aa8.21□□□□□ -1.09
VPS25-203ENST00000589520 IGHV7-81A0A0B4J1V7 117 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 MSMBP08118 114 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 PSG1P11464 419 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 GALR1P47211 349 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
VPS25-203ENST00000589520 TIGITQ495A1 244 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 FAM110DQ8TAY7 271 aaPredicted RBP8.21□□□□□ -1.1
VPS25-203ENST00000589520 FXYD5Q96DB9 178 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 SMIM12Q96EX1 92 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 SRD5A3Q9H8P0 318 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 MRPL27Q9P0M9 148 aaKnown RBP8.21□□□□□ -1.1
VPS25-203ENST00000589520 OTOGQ6ZRI0 2925 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 CSMD1Q96PZ7 3565 aa8.21□□□□□ -1.1
VPS25-203ENST00000589520 CELSR2Q9HCU4 2923 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 F8P00451 2351 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 J3QLI3 93 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 M0QZK8 103 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 GNG7O60262 68 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 OR10J4P0C629 311 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 NBEAP1P0C6P0 100 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 APELAP0DMC3 54 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 CD24P25063 80 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 CRYBB3P26998 211 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 RPL35P42766 123 aaKnown RBP8.2□□□□□ -1.1
VPS25-203ENST00000589520 GNG4P50150 75 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 CNN1P51911 297 aaKnown RBP8.2□□□□□ -1.1
VPS25-203ENST00000589520 KIAA0141Q14154 515 aaPredicted RBP8.2□□□□□ -1.1
VPS25-203ENST00000589520 ZNF343Q6P1L6 599 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 LRRC75A-AS1Q8N1F1 130 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 OR10G8Q8NGN5 311 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 OCC1Q8TAD7 63 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 C2CD4CQ8TF44 421 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 SFRP2Q96HF1 295 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 FANCD2OSQ96PS1 177 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
VPS25-203ENST00000589520 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 CDC42EP3Q9UKI2 254 aa8.2□□□□□ -1.1
VPS25-203ENST00000589520 IGHV4-30-2A0A087WSY4 118 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 TRAV5A0A0B4J249 113 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 GGCTO75223 188 aaKnown RBP8.19□□□□□ -1.1
VPS25-203ENST00000589520 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 IGHV3-48P01763 117 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 TYMSP04818 313 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 CXCL1P09341 107 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 HIST1H1EP10412 219 aaKnown RBP8.19□□□□□ -1.1
VPS25-203ENST00000589520 MYCNOSP40205 109 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 RAB9AP51151 201 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
VPS25-203ENST00000589520 FAM3BP58499 235 aaPredicted RBP8.19□□□□□ -1.1
VPS25-203ENST00000589520 CLEC12BQ2HXU8 276 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 ASPHD1Q5U4P2 390 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 BPIFA4PQ86YQ2 179 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 LYPD1Q8N2G4 141 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 PIP4P2Q8N4L2 257 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 FAM103A1Q9BTL3 118 aaKnown RBP8.19□□□□□ -1.1
VPS25-203ENST00000589520 CHRDL1Q9BU40 450 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 SLC25A39Q9BZJ4 359 aaPredicted RBP8.19□□□□□ -1.1
VPS25-203ENST00000589520 MOB4Q9Y3A3 225 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 URGCP-MRPS24S4R325 110 aa8.19□□□□□ -1.1
VPS25-203ENST00000589520 C5orf52A6NGY3 159 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 AP4M1O00189 453 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 NDUFB8O95169 186 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 BRI3O95415 125 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 GCGP01275 180 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 EGR2P11161 476 aaPredicted RBP8.18□□□□□ -1.1
VPS25-203ENST00000589520 LYZP61626 148 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 COX19Q49B96 90 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 Q56UQ5 140 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 FAM120AOSQ5T036 256 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 TEX38Q6PEX7 206 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 UNQ5815/PRO19632Q6UWF5 114 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 ZNF329Q86UD4 541 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms