RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 IGHV3-66A0A0C4DH42 116 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 H3BS24 57 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 H3BUA1 57 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 I3L521 148 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 CORTO00230 105 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 HMGB3O15347 200 aaKnown RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 TGOLN2O43493 480 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 YIF1AO95070 293 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 IFNA5P01569 189 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 CTSGP08311 255 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 SNRPCP09234 159 aaKnown RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 LGALS1P09382 135 aaKnown RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 LINC00869P0C866 280 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 PSG1P11464 419 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 GPX4P36969 197 aaPredicted RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 CAMLGP49069 296 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 RAB2AP61019 212 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 LYZP61626 148 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 FOXL1Q12952 345 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 MORN5Q5VZ52 161 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 SPATA31B1PQ5VZV4 182 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 ETFRF1Q6IPR1 90 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 CYP2G1PQ6ZSU1 146 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 TMEM144Q7Z5S9 345 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 RNF152Q8N8N0 203 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 THAP8Q8NA92 274 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 OR51G1Q8NGK1 321 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 OR1L6Q8NGR2 347 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 OR4X1Q8NH49 305 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 SCGB1C1Q8TD33 95 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 VN1R17PQ8TDU5 208 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 TMED6Q8WW62 240 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 CACNG8Q8WXS5 425 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 ST8SIA2Q92186 375 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 USMG5Q96IX5 58 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 C20orf24Q9BUV8 137 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 PBDC1Q9BVG4 233 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 GON7Q9BXV9 100 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 SLC25A32Q9H2D1 315 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 THYN1Q9P016 225 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 PEF1Q9UBV8 284 aaKnown RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 SLC45A2Q9UMX9 530 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 LSM4Q9Y4Z0 139 aaKnown RBP4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 PXMP4Q9Y6I8 212 aa4.62□□□□□ -1.67
CAPNS1-208ENST00000589162 ZFHX3Q15911 3703 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 MTORP42345 2549 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TRBV7-1A0A0A6YYK4 115 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 BORCS7-ASMTA0A0B4J1R7 106 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 A0A0G2JLM5 398 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 A0A1B0GV50 99 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 CYB5BO43169 146 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 DFFBO76075 338 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 LY86O95711 162 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 APOHP02749 345 aaPredicted RBP4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 HOXD3P31249 432 aaPredicted RBP4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 NPBWR1P48145 328 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 FHITP49789 147 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 ATP5IP56385 69 aaPredicted RBP4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 SYNJ2BPP57105 145 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 IFITM2Q01629 132 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 USF2Q15853 346 aaPredicted RBP4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 ATP6V1FQ16864 119 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TM4SF20Q53R12 229 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 FFAR4Q5NUL3 377 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 FAM122CQ6P4D5 195 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TEPPQ6URK8 271 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 ALKAL2Q6UX46 152 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TOMM20LQ6UXN7 152 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 PATE2Q6UY27 113 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 C12orf54Q6X4T0 127 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 SSX7Q7RTT5 188 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 STPG3Q8N7X2 389 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TMEM116Q8NCL8 245 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 OR11H1Q8NG94 326 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 OR1B1Q8NGR6 318 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 OR1N2Q8NGR9 330 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 C4orf3Q8WVX3 66 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 CXorf58Q96LI9 332 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 UBE2E2Q96LR5 201 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 UHRF2Q96PU4 802 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 TRGV9Q99603 122 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 GINS3Q9BRX5 216 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 NPCDR1Q9BY65 106 aa4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 PUS1Q9Y606 427 aaKnown RBP eCLIP4.61□□□□□ -1.67
CAPNS1-208ENST00000589162 CUBNO60494 3623 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 SVEP1Q4LDE5 3571 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 ZNF320A2RRD8 509 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 TEX46H3BTG2 121 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 H3BTX0 84 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 CCL24O00175 119 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 NUPL2O15504 423 aaKnown RBP4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 BRI3O95415 125 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 TOMM40O96008 361 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 IL4P05112 153 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 OR5G3P0C626 314 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 RD3LP0DJH9 198 aa4.6□□□□□ -1.67
CAPNS1-208ENST00000589162 TPT1P13693 172 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms