RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PF4V1P10720 104 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 ADMP35318 185 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 FAM78BQ5VT40 261 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 CHRDL1Q9BU40 450 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 DNAJC4Q9NNZ3 241 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 SERTAD4Q9NUC0 356 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 DOK5Q9P104 306 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 FABP1P07148 127 aa20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 PSMB8P28062 276 aa20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 HILS1P60008 231 aa20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 OR1L4Q8NGR5 311 aa20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 ZNF418Q8TF45 676 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 FAM210AQ96ND0 272 aa20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 FUT9Q9Y231 359 aa20.2■□□□□ 0.82
SCAMP4-210ENST00000588555 RNASE1P07998 156 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 STAG3L2P0CL84 134 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 STAG3L3P0CL85 134 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 GPR183P32249 361 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 RAB9AP51151 201 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 SRSF3P84103 164 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 C10orf99Q6UWK7 81 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 LCNL1Q6ZST4 164 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 ZNF414Q96IQ9 312 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 USMG5Q96IX5 58 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 ATP6V0BQ99437 205 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 PFDN5Q99471 154 aa20.19■□□□□ 0.82
SCAMP4-210ENST00000588555 TMEM89A2RUT3 159 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 COX7A2P2O60397 106 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 CLEC3BP05452 202 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 MIR17HGQ75NE6 70 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 ORM2P19652 201 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 C10orf113Q5VZT2 155 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 CLEC19AQ6UXS0 136 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 Q6ZSV7 163 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 OR51G1Q8NGK1 321 aa20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 GAR1Q9NY12 217 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 FN1P02751 2386 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-210ENST00000588555 ELOA3CA0A087WX78 387 aaPredicted RBP20.17■□□□□ 0.82
SCAMP4-210ENST00000588555 CYSRT1A8MQ03 144 aa20.17■□□□□ 0.82
SCAMP4-210ENST00000588555 MORN5Q5VZ52 161 aa20.17■□□□□ 0.82
SCAMP4-210ENST00000588555 OR1B1Q8NGR6 318 aa20.17■□□□□ 0.82
SCAMP4-210ENST00000588555 RNF2Q99496 336 aa20.17■□□□□ 0.82
SCAMP4-210ENST00000588555 MRPL32Q9BYC8 188 aaKnown RBP20.17■□□□□ 0.82
SCAMP4-210ENST00000588555 UQCC3Q6UW78 93 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 ZNF491Q8N8L2 437 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 UHRF2Q96PU4 802 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 TMPRSS5Q9H3S3 457 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 F8P00451 2351 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 WI2-2373I1.2A0A1W2PRP0 233 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 NUPL2O15504 423 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 HYPMO75409 117 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 SCGB2A1O75556 95 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 OR2C1O95371 312 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 RPL15P61313 204 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 LYZP61626 148 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 PMS2P11Q13670 270 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 GUK1Q16774 197 aa20.16■□□□□ 0.82
SCAMP4-210ENST00000588555 TGOLN2O43493 480 aa20.15■□□□□ 0.82
SCAMP4-210ENST00000588555 CD5P06127 495 aa20.15■□□□□ 0.82
SCAMP4-210ENST00000588555 ARL14EPLP0DKL9 152 aa20.15■□□□□ 0.82
SCAMP4-210ENST00000588555 TOR2AQ5JU69 321 aa20.15■□□□□ 0.82
SCAMP4-210ENST00000588555 SLC35B1P78383 322 aa20.14■□□□□ 0.81
SCAMP4-210ENST00000588555 KIAA0141Q14154 515 aaPredicted RBP20.14■□□□□ 0.81
SCAMP4-210ENST00000588555 TEX38Q6PEX7 206 aa20.14■□□□□ 0.81
SCAMP4-210ENST00000588555 RNF125Q96EQ8 232 aa20.14■□□□□ 0.81
SCAMP4-210ENST00000588555 TMEM231Q9H6L2 316 aa20.14■□□□□ 0.81
SCAMP4-210ENST00000588555 MRPL27Q9P0M9 148 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-210ENST00000588555 A0A0G2JLM5 398 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 CXorf1O96002 111 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 IL4P05112 153 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 LINC00305Q7Z4B0 112 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 Q8WTZ3 238 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 FAM167A-AS1Q96KT0 104 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 GNG13Q9P2W3 67 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 FOXE3Q13461 319 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 ZNF503Q96F45 646 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 RARRES2Q99969 163 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 PBDC1Q9BVG4 233 aa20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 TECRQ9NZ01 308 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-210ENST00000588555 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 RBFOX3A6NFN3 312 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 ELANEP08246 267 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 C8orf88P0DMB2 117 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 ZNF343Q6P1L6 599 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 ZNF600Q6ZNG1 722 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 RNF152Q8N8N0 203 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 MYOZ3Q8TDC0 251 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 HIGD1AQ9Y241 93 aa20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 PUS1Q9Y606 427 aaKnown RBP eCLIP20.12■□□□□ 0.81
SCAMP4-210ENST00000588555 TRAV5A0A0B4J249 113 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 C9JQL5 133 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 I3L521 148 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 IGHV3-11P01762 117 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 USF2Q15853 346 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 HAGHQ16775 308 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 SLC25A2Q9BXI2 301 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 EIF5A2Q9GZV4 153 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 PPP5D1E7EU14 171 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 S100A1P23297 94 aa20.11■□□□□ 0.81
SCAMP4-210ENST00000588555 TAS2R45P59539 299 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms