RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 CCL18P55774 89 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 SPCS3P61009 180 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 FAM78BQ5VT40 261 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.69
IFT20-216ENST00000588477 ZNF486Q96H40 463 aaPredicted RBP10.71□□□□□ -0.69
IFT20-216ENST00000588477 ACY3Q96HD9 319 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 TMEM208Q9BTX3 173 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 LINC00588Q9Y4M8 146 aa10.71□□□□□ -0.69
IFT20-216ENST00000588477 PRM2P04554 102 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 RCVRNP35243 200 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 ALDH3B2P48448 385 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 PSMB3P49720 205 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 SPATA31B1PQ5VZV4 182 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 ETFRF1Q6IPR1 90 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 RNF125Q96EQ8 232 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 PBDC1Q9BVG4 233 aa10.7□□□□□ -0.7
IFT20-216ENST00000588477 EPM2AB3EWF7 344 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 F5H768 121 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 SOCS3O14543 225 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 DEFB130BP0DP73 79 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 DEFB130AP0DP74 79 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 RPS19P39019 145 aaKnown RBP10.69□□□□□ -0.7
IFT20-216ENST00000588477 PAX9P55771 341 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 SNX29P2Q8IUI4 249 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 SLC24A4Q8NFF2 622 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 OR52E5Q8NH55 327 aa10.69□□□□□ -0.7
IFT20-216ENST00000588477 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
IFT20-216ENST00000588477 A0A0J9YX75 114 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 SMIM31A0A1B0GVY4 71 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 ZNF705GA8MUZ8 300 aaPredicted RBP10.68□□□□□ -0.7
IFT20-216ENST00000588477 UCP1P25874 307 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 NUP62P37198 522 aaPredicted RBP10.68□□□□□ -0.7
IFT20-216ENST00000588477 FCN2Q15485 313 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 LHFPL1Q86WI0 220 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 TMEM170AQ8WVE7 144 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 GPR146Q96CH1 333 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 COPZ2Q9P299 210 aa10.68□□□□□ -0.7
IFT20-216ENST00000588477 CEBPZOSA8MTT3 80 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 NEDD8Q15843 81 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 AARDQ4LEZ3 155 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 IGF2BP2-AS1Q96M15 143 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 Q9H8V8 135 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 PFDN2Q9UHV9 154 aa10.67□□□□□ -0.7
IFT20-216ENST00000588477 ISLRO14498 428 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 SUPT4H1P63272 117 aaKnown RBP10.66□□□□□ -0.7
IFT20-216ENST00000588477 CLINT1Q14677 625 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 OR8G2PQ6IF36 304 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 FAM219AQ8IW50 185 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 CCDC71LQ8N9Z2 235 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 ABHD1Q96SE0 405 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 RPRMQ9NS64 109 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 DOK5Q9P104 306 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 COMMD3Q9UBI1 195 aa10.66□□□□□ -0.7
IFT20-216ENST00000588477 DMBT1Q9UGM3 2413 aaPredicted RBP10.65□□□□□ -0.7
IFT20-216ENST00000588477 ATP5G1P05496 136 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 ELK1P19419 428 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 ATP5G3P48201 142 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 RNASE12Q5GAN4 147 aaKnown RBP10.65□□□□□ -0.7
IFT20-216ENST00000588477 RNASE10Q5GAN6 216 aaKnown RBP10.65□□□□□ -0.7
IFT20-216ENST00000588477 AMTNQ6UX39 209 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 ZFAND1Q8TCF1 268 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 RNF141Q8WVD5 230 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 C20orf173Q96LM9 149 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 KRTAP1-5Q9BYS1 174 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 CACNG5Q9UF02 275 aa10.65□□□□□ -0.7
IFT20-216ENST00000588477 CDS2O95674 445 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 LSM3P62310 102 aaKnown RBP10.64□□□□□ -0.71
IFT20-216ENST00000588477 DLK1P80370 383 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 ZNF90Q03938 601 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 KLF9Q13886 244 aaPredicted RBP10.64□□□□□ -0.71
IFT20-216ENST00000588477 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 C1orf194Q5T5A4 169 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 NOXA1Q86UR1 476 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 ARRDC1Q8N5I2 433 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 LHFPL5Q8TAF8 219 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 C16orf92Q96LL3 132 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 TMEM222Q9H0R3 208 aa10.64□□□□□ -0.71
IFT20-216ENST00000588477 CBY3A6NI87 242 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 ZFP92A6NM28 416 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 A8MTW9 85 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 M0R2Z0 102 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 B3GALNT1O75752 331 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 APOA1P02647 267 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 CD3DP04234 171 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 OR5AC1P0C628 307 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 AZU1P20160 251 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
IFT20-216ENST00000588477 LYZP61626 148 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 MEF2DQ14814 521 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 NMSQ5H8A3 153 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 OR8I2Q8N0Y5 310 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 OR13C8Q8NGS7 320 aa10.63□□□□□ -0.71
IFT20-216ENST00000588477 MARCH1Q8TCQ1 289 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms